Factsheet for TraesCS3D01G268400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G302700.1	Wheat	mitochondrion	98.32	98.32
TraesCS3A01G268300.1	Wheat	mitochondrion	93.27	94.22
Os08t0310100-01	Rice	nucleus	78.11	78.64
Zm00001d040588_P004	Maize	mitochondrion	75.76	78.4
EES00619	Sorghum	mitochondrion	76.77	78.08
KRH13508	Soybean	cytosol	24.92	71.84
HORVU3Hr1G062510.1	Barley	plastid	78.79	71.56
PGSC0003DMT400043119	Potato	mitochondrion, plastid	63.3	66.67
Solyc02g081310.2.1	Tomato	plastid	62.96	66.31
GSMUA_Achr11P...	Banana	mitochondrion	65.32	65.99
VIT_13s0019g04930.t01	Wine grape	mitochondrion	62.29	65.37
KRH13797	Soybean	mitochondrion	59.6	63.21
KRH43653	Soybean	mitochondrion	59.6	63.21
CDY18700	Canola	mitochondrion, plastid	58.92	62.95
AT5G64670.1	Thale cress	mitochondrion, plastid	58.92	62.28
Bra024320.1-P	Field mustard	mitochondrion, plastid	58.59	61.92
CDY08860	Canola	mitochondrion, plastid	58.25	61.57
CDX81240	Canola	mitochondrion, plastid	58.25	61.57
CDX84541	Canola	mitochondrion, plastid	57.91	61.21
Bra037788.1-P	Field mustard	mitochondrion, plastid	57.24	61.15
HORVU4Hr1G078100.1	Barley	plastid	24.24	55.81
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	26.6	48.47
TraesCS4D01G242400.1	Wheat	plastid	21.55	24.15

Protein Annotations

MapMan:17.7.1.1.13	Gene3D:3.100.10.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	InterPro:L18e/L15P_sf
HAMAP:MF_01341	PFAM:PF00828	PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15	InterPro:Ribosomal_L15_bac-type
InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080	TIGRFAMs:TIGR01071	EnsemblPlantsGene:TraesCS3D01G268400	EnsemblPlants:TraesCS3D01G268400.1	SEG:seg

Description

No Description!

Coordinates

chr3D:+:372627048..372630643

Molecular Weight (calculated)

32531.0 Da

IEP (calculated)

12.082

GRAVY (calculated)

-0.561

Length

297 amino acids

Sequence
(BLAST)

001: MLRRASQLLR TIPAATVFPR RLPQPHRHPL PAPPAYLSPA PRQPSYFYAT ESAAAPAARP PKVPRPLRTV GSLLRLNDIR DNPGATQQKT RKGRGIGSGK
101: GKTAGRGHKG QKARGTARFG FEGGQTPLRR RLPRRGFKNR FSLTFQPCGL GKIAKLINAG KIDSSELITM KTLKDTSAIG KQIKDGIRLM GRGAEEIKWP
201: IHLEVSRATA RAKAAVEAAG GTVRLVYYNK LGFRALLKPE WFAKKGRLIP KAARPPPKQR DKVDSIGRLP APTKPLPFTS EELEFTAKRE AAKVIAA

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.