Factsheet for HORVU3Hr1G062510.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G268400.1	Wheat	mitochondrion	71.56	78.79
TraesCS3B01G302700.1	Wheat	mitochondrion	71.56	78.79
TraesCS3A01G268300.1	Wheat	mitochondrion	67.89	75.51
EES00619	Sorghum	mitochondrion	67.28	75.34
Os08t0310100-01	Rice	nucleus	67.28	74.58
Zm00001d040588_P004	Maize	mitochondrion	65.44	74.56
KRH13508	Soybean	cytosol	22.32	70.87
VIT_13s0019g04930.t01	Wine grape	mitochondrion	57.8	66.78
PGSC0003DMT400043119	Potato	mitochondrion, plastid	56.57	65.6
GSMUA_Achr11P...	Banana	mitochondrion	58.72	65.31
Solyc02g081310.2.1	Tomato	plastid	55.96	64.89
CDY18700	Canola	mitochondrion, plastid	54.74	64.39
AT5G64670.1	Thale cress	mitochondrion, plastid	54.74	63.7
Bra024320.1-P	Field mustard	mitochondrion, plastid	54.43	63.35
CDY08860	Canola	mitochondrion, plastid	53.82	62.63
CDX84541	Canola	mitochondrion, plastid	53.82	62.63
CDX81240	Canola	mitochondrion, plastid	53.82	62.63
Bra037788.1-P	Field mustard	mitochondrion, plastid	52.6	61.87
KRH43653	Soybean	mitochondrion	52.91	61.79
KRH13797	Soybean	mitochondrion	52.29	61.07
HORVU4Hr1G078100.1	Barley	plastid	22.02	55.81
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	23.55	47.24

Protein Annotations

MapMan:17.7.1.1.13	Gene3D:3.100.10.10	UniProt:A0A287LAT3	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538
EnsemblPlantsGene:HORVU3Hr1G062510	EnsemblPlants:HORVU3Hr1G062510.1	InterPro:L18e/L15P_sf	HAMAP:MF_01341	PFAM:PF00828	PANTHER:PTHR12934
PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15	InterPro:Ribosomal_L15_bac-type	InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080	TIGRFAMs:TIGR01071
UniParc:UPI000B46F54C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:477189428..477196766

Molecular Weight (calculated)

35471.3 Da

IEP (calculated)

12.264

GRAVY (calculated)

-0.630

Length

327 amino acids

Sequence
(BLAST)

001: MLASSQHSAP SQGKTERTLN PRRTQTGGGS RQRTTAAMLR RASQLLRTIP AAAVLPRRLP QPHPAPPARL LPAPGQPSYF YATQSAAARP PKASRPLRTA
101: GSLLRLNDLR DNPGATQQKT RKGRGIGSGK GKTAGRGHKG QKARGTARFG FEGGQTPLRR RLPRRGFKNR FSLTFQPCGL GKIAKLINAG KIDSSELITM
201: KTLKDTSAIG KQIKDGIRLM GRGAEEIKWP VHLEVSRATA RAKAAVEAAG GTVRLVYYNK LGFRALLKPE WFAKKGRLIP KAARPPPKQR DKVDSIGRLP
301: APTKPLPFTS EELEFTAKRE AAKVIAA

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.