Factsheet for GSMUA_Achr11P18870_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13508	Soybean	cytosol	25.17	71.84
PGSC0003DMT400043119	Potato	mitochondrion, plastid	66.33	69.15
Solyc02g081310.2.1	Tomato	plastid	65.65	68.44
Zm00001d040588_P004	Maize	mitochondrion	65.65	67.25
KRH13797	Soybean	mitochondrion	63.61	66.79
EES00619	Sorghum	mitochondrion	66.33	66.78
VIT_13s0019g04930.t01	Wine grape	mitochondrion	63.27	65.72
KRH43653	Soybean	mitochondrion	62.59	65.71
TraesCS3A01G268300.1	Wheat	mitochondrion	65.65	65.65
Os08t0310100-01	Rice	nucleus	65.65	65.42
TraesCS3D01G268400.1	Wheat	mitochondrion	65.99	65.32
Bra024320.1-P	Field mustard	mitochondrion, plastid	62.24	65.12
TraesCS3B01G302700.1	Wheat	mitochondrion	65.65	64.98
CDY08860	Canola	mitochondrion, plastid	61.56	64.41
CDX84541	Canola	mitochondrion, plastid	61.56	64.41
CDX81240	Canola	mitochondrion, plastid	61.22	64.06
AT5G64670.1	Thale cress	mitochondrion, plastid	61.22	64.06
CDY18700	Canola	mitochondrion, plastid	60.54	64.03
Bra037788.1-P	Field mustard	mitochondrion, plastid	59.52	62.95
HORVU3Hr1G062510.1	Barley	plastid	65.31	58.72
HORVU4Hr1G078100.1	Barley	plastid	22.45	51.16
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	23.81	42.94
GSMUA_Achr10P...	Banana	cytosol	18.03	36.55
GSMUA_Achr1P22410_001	Banana	mitochondrion	12.59	17.96

Protein Annotations

MapMan:17.7.1.1.13	Gene3D:3.100.10.10	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr11G18870_001
EnsemblPlants:GSMUA_Achr11P18870_001	EnsemblPlants:GSMUA_Achr11T18870_001	InterPro:L18e/L15P_sf	UniProt:M0RTG7	HAMAP:MF_01341	PFAM:PF00828
PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15	InterPro:Ribosomal_L15_bac-type	InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080
TIGRFAMs:TIGR01071	UniParc:UPI000296BE2C	SEG:seg	:	:	:

Description

50S ribosomal protein L15 [Source:GMGC_GENE;Acc:GSMUA_Achr11G18870_001]

Coordinates

chr11:+:20157651..20160544

Molecular Weight (calculated)

31822.0 Da

IEP (calculated)

12.068

GRAVY (calculated)

-0.483

Length

294 amino acids

Sequence
(BLAST)

001: MWRRRLSVLS DLPFPIRRPL PVTRPPSISI APLARALKSP PPTAAAAAAM DAGFTPFGIF RSSYSGMAMG SSPATASLLS LNDLRDNKGA RQKKKRKGRG
101: IGSGKGKTAG RGHKGQKARG TSKFGFEGGQ TPLRRRLPRR GFKNPFSLTF QPVGLGKIAK LINAGKIDSS ELITMKTLKD TGAIGKHIED GIRLMARGSE
201: HINWPIHLEV SRVTVRAKAA VEAAGGSVRK VYYNKLGFRA LLTPEWFAKK GRLLPRPARP PPKQRDRVDD IGRLPAPTKP IPTTTEEKDA TAAA

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.