Factsheet for Bra024320.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08860	Canola	mitochondrion, plastid	95.37	95.37
CDX84541	Canola	mitochondrion, plastid	95.02	95.02
Bra037788.1-P	Field mustard	mitochondrion, plastid	89.32	90.29
AT5G64670.1	Thale cress	mitochondrion, plastid	88.97	88.97
KRH13508	Soybean	cytosol	27.4	74.76
VIT_13s0019g04930.t01	Wine grape	mitochondrion	71.53	71.02
PGSC0003DMT400043119	Potato	mitochondrion, plastid	66.19	65.96
Solyc02g081310.2.1	Tomato	plastid	65.84	65.6
KRH43653	Soybean	mitochondrion	64.77	65.0
KRH13797	Soybean	mitochondrion	64.41	64.64
Zm00001d040588_P004	Maize	mitochondrion	63.7	62.37
EES00619	Sorghum	mitochondrion	64.77	62.33
GSMUA_Achr11P...	Banana	mitochondrion	65.12	62.24
Os08t0310100-01	Rice	nucleus	64.77	61.69
TraesCS3A01G268300.1	Wheat	mitochondrion	62.28	59.52
TraesCS3D01G268400.1	Wheat	mitochondrion	61.92	58.59
TraesCS3B01G302700.1	Wheat	mitochondrion	61.57	58.25
HORVU3Hr1G062510.1	Barley	plastid	63.35	54.43
HORVU4Hr1G078100.1	Barley	plastid	20.28	44.19
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	24.56	42.33
Bra025174.1-P	Field mustard	plastid	23.49	24.44
Bra017341.1-P	Field mustard	plastid	22.78	22.86

Protein Annotations

MapMan:17.7.1.1.13	Gene3D:3.100.10.10	EnsemblPlantsGene:Bra024320	EnsemblPlants:Bra024320.1	EnsemblPlants:Bra024320.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015934	GO:GO:0019538	InterPro:L18e/L15P_sf	UniProt:M4E6B6	HAMAP:MF_01341	PFAM:PF00828
PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15	InterPro:Ribosomal_L15_bac-type	InterPro:Ribosomal_L18e/L15P	SUPFAM:SSF52080
TIGRFAMs:TIGR01071	UniParc:UPI000253F41C	SEG:seg	:	:	:

Description

AT5G64670 (E=3e-125) | ribosomal protein L15 family protein

Coordinates

chrA06:-:14931218..14932422

Molecular Weight (calculated)

31110.2 Da

IEP (calculated)

11.728

GRAVY (calculated)

-0.504

Length

281 amino acids

Sequence
(BLAST)

001: MIRRRISSII STSLFNSSIH HSANPRFIIS SPALQCRRSP ILTQVPSFPG GVSSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGQ IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADEIKWPL HLEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD RVDSIGRLPA PKKPIPFYAA EESKVESPVE S

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.