CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040588_P004	Maize	mitochondrion	84.59	86.06
Os08t0310100-01	Rice	nucleus	82.88	82.03
TraesCS3A01G268300.1	Wheat	mitochondrion	77.74	77.21
TraesCS3D01G268400.1	Wheat	mitochondrion	78.08	76.77
TraesCS3B01G302700.1	Wheat	mitochondrion	77.74	76.43
KRH13508	Soybean	cytosol	26.03	73.79
VIT_13s0019g04930.t01	Wine grape	mitochondrion	67.12	69.26
PGSC0003DMT400043119	Potato	mitochondrion, plastid	66.44	68.79
Solyc02g081310.2.1	Tomato	plastid	66.1	68.44
HORVU3Hr1G062510.1	Barley	plastid	75.34	67.28
GSMUA_Achr11P...	Banana	mitochondrion	66.78	66.33
KRH43653	Soybean	mitochondrion	63.01	65.71
CDY18700	Canola	mitochondrion, plastid	62.33	65.47
KRH13797	Soybean	mitochondrion	62.67	65.36
Bra024320.1-P	Field mustard	mitochondrion, plastid	62.33	64.77
AT5G64670.1	Thale cress	mitochondrion, plastid	62.33	64.77
CDY08860	Canola	mitochondrion, plastid	61.3	63.7
CDX84541	Canola	mitochondrion, plastid	61.3	63.7
CDX81240	Canola	mitochondrion, plastid	61.3	63.7
Bra037788.1-P	Field mustard	mitochondrion, plastid	59.93	62.95
HORVU4Hr1G078100.1	Barley	plastid	24.66	55.81
HORVU5Hr1G041420.1	Barley	endoplasmic reticulum	26.71	47.85
EER95259	Sorghum	plastid	22.26	24.16

Protein Annotations

MapMan:17.7.1.1.13	Gene3D:3.100.10.10	EntrezGene:8078164	UniProt:C5XI34	EnsemblPlants:EES00619	ProteinID:EES00619
ProteinID:EES00619.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005762	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538
InterPro:L18e/L15P_sf	HAMAP:MF_01341	PFAM:PF00828	PANTHER:PTHR12934	PANTHER:PTHR12934:SF12	InterPro:Ribosomal_L15
InterPro:Ribosomal_L15_bac-type	InterPro:Ribosomal_L18e/L15P	EnsemblPlantsGene:SORBI_3003G141700	SUPFAM:SSF52080	unigene:Sbi.18494	TIGRFAMs:TIGR01071
UniParc:UPI0001A843E1	RefSeq:XP_002455499.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:14034108..14039522

Molecular Weight (calculated)

31510.7 Da

IEP (calculated)

12.183

GRAVY (calculated)

-0.456

Length

292 amino acids

Sequence
(BLAST)

001: MWRRASRLLL RTTAAIPTRR LLPSHPPLPL APRVASASSS YATAAAAAAA AAVSAPAARA PRTVGTLLRL NDLRDNPGAR KQKTRKGRGI GSGKGKTAGR
101: GHKGQKARGT ARFGFEGGQT PLRRRLPRRG FKNPFSLTFQ PCGLGKIAKL INAGKIDSSE LITMKTLKET GAIGKQIKDG IRLMGRGAEE IKWPIHLEVS
201: RATARAKAAV EAAGGTVRLV YYNKLGFRAL LKPEWFEKKG RLLPKAARPP PKQRDKVDSI GRLPAPTKPL PFTPEELEFA AKRDAARMTV TA

Best Arabidopsis Sequence Match ( AT5G64670.1 )
(BLAST)

001: MLRRRLLSII STSLINSSFH QTAKPRFIIS SPLLQCRPSP ISTQIPTSTS RALSFQGIRA YSLLSLNDLR DNVPRKLKTR KGRGIGSGKG KTAGRGHKGQ
101: KARGTMKFGF EGGQTPLRRR LPKRGFKNKF KLHFQPVGLG KIAKLINAGK IDSHELITMK TLKDVGAIGK QIEDGVRLMG RGADDIKWPL HFEVSRVTVR
201: AKEVVEAAGG SVRRVYYNKL GLRALLKPEW FEKKGRLLPK AARPPPKQQD KVDSIGRLPA PKKPIPFFAA EETKVESPVE S

Arabidopsis Description

Ribosomal protein L18e/L15 superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FLF3]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.