Factsheet for Os03t0184700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 15939553

extracellular: 25047395

gfp PMID: 15939553 doi

Y Mori, T Yamamoto, N Sakaguchi, T Ishibashi, T Furukawa, Y Kadota, K Kuchitsu, J Hashimoto, S Kimura, K Sakaguchi

Department of Applied Biological Science, Faculty of Science and Technology, Science University of Tokyo, 2641 Yamazaki, Noda-shi, Chiba-ken 278-8510, Japan.

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0184700-01
Os07t0628600-00
Os10t0402200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37560.1	Os07t0628600-00	AT1G26840.1	16179646
AT2G37560.1	Os03t0184700-01	AT2G37560.1	16179646
AT2G37560.1	Os10t0402200-01	AT5G16690.1	16179646

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G003800.1	Wheat	nucleus	89.45	88.98
TraesCS4D01G299900.1	Wheat	nucleus	89.18	88.71
TraesCS4B01G301600.1	Wheat	nucleus	88.65	88.42
EER93232	Sorghum	nucleus	87.34	87.8
EER92739	Sorghum	nucleus	86.02	86.7
Zm00001d017423_P001	Maize	nucleus	84.7	85.15
GSMUA_Achr10P...	Banana	nucleus	52.51	64.82
KRH05698	Soybean	endoplasmic reticulum, extracellular	49.08	63.7
Solyc06g073510.2.1	Tomato	nucleus	58.84	61.43
Bra005184.1-P	Field mustard	nucleus	58.58	61.16
PGSC0003DMT400069464	Potato	nucleus	58.58	61.16
KRH15345	Soybean	nucleus	58.58	60.66
CDX74950	Canola	nucleus	58.05	60.61
CDY70246	Canola	nucleus	58.05	60.61
AT2G37560.1	Thale cress	nucleus	57.52	60.06
VIT_18s0001g10740.t01	Wine grape	nucleus	49.08	59.05

Protein Annotations

MapMan:13.2.1.1.2	EntrezGene:4331860	EMBL:AB104466	ProteinID:ABF94350.1	EMBL:AF140487	EMBL:AK242821
ProteinID:BAF11106.1	ProteinID:BAS82665.1	ProteinID:EEE58456.1	GO:GO:0000808	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003688	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005664	GO:GO:0006139	GO:GO:0006259	GO:GO:0006260	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:ORC2	EnsemblPlantsGene:Os03g0184700	EnsemblPlants:Os03t0184700-01
PFAM:PF04084	PANTHER:PTHR14052	UniProt:Q10QS7	UniParc:UPI0000DB44EB	RefSeq:XP_015632472.1	RefSeq:XP_015632473.1
SEG:seg	:	:	:	:	:

Description

ORIGIN RECOGNITION COMPLEX 2Origin recognition complex subunit 2 (Origin recognition complex2). (Os03t0184700-01)

Coordinates

chr3:-:4446728..4449163

Molecular Weight (calculated)

42592.8 Da

IEP (calculated)

6.750

GRAVY (calculated)

-0.264

Length

379 amino acids

Sequence
(BLAST)

001: MALRGGHAAA AAGVSSGSED DDEEAGFSRS YFLAKEKEPS SGKKRARAAG KLSDLNLVDE QVLRASLAEI PPKHEREVEA LTRSYKEQYR NWLFELRCGF
101: GLLMYGFGSK KMLLEDFAST TLSDFTVIVV NGYLPSINLK QVIVTIAEIF WEQTKLKRKR QTATRSQLQP FASQSIDDII SFLNNQTSDN GDDNVCLLIH
201: NIDGPALRDA ESQQYLAQVS CCPQVHVVAS VDHVNAPLLW DKKMVHTQFK WSWYHVPTFA PYKVEGVFYP LILASGGHAQ TMKTALVVLQ SLTPNAQSVF
301: RVLAEYQLAH EKEEGMHFSS LYTKCRERFL VSSQVTLNSH LTEFKDHDLV KIRKHSDGQD CLHIPLVSDA LEKLLQELT

Best Arabidopsis Sequence Match ( AT2G37560.1 )
(BLAST)

001: MEDIENIEED EYGFSRNYFL AKELGGASKR SAHKLSDIHI VDEQELRETA STIEMKHSKE ISELMSDYKT MYSKWVFELR CGFGLLMYGF GSKKALVEDF
101: ASASLTDYSV VVINGYLPSV NLKQVLLALA ELLSELLKCK RKSSGSLSKG QETFPSRSMD DILSFLHGPQ SGDKDCFICV VVHNIDGPAL RDPESQQTLA
201: RLSSCSHIRL VASIDHVNAP LLWDKKMVHK QFNWLWHHVP TFAPYNVEGV FFPLVLAQGS TAQTAKTAAI VLQSLTPNGQ NVFKILAEYQ LSHPDEDGMP
301: TDDLYSASRE RFFVSSQVTL NSHLTEFKDH ELVKTKRNSD GQECLNIPLT SDAIRQLLLD LNQ

Arabidopsis Description

ORC2Origin of replication complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q38899]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.