Factsheet for Os04t0431200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017163	Potato	cytosol	22.15	42.31
TraesCS2D01G302000.2	Wheat	cytosol	79.19	36.09
TraesCS2A01G303500.1	Wheat	cytosol	79.19	36.09
TraesCS2B01G320100.2	Wheat	cytosol	78.52	35.24
EES10826	Sorghum	cytosol	77.18	35.17
Zm00001d025421_P001	Maize	cytosol	77.85	32.4
VIT_18s0001g02630.t01	Wine grape	cytosol	59.73	27.13
AT1G21760.1	Thale cress	cytosol	59.06	26.83
KRH53264	Soybean	cytosol	59.06	26.75
Bra017949.1-P	Field mustard	cytosol	59.73	26.41
KRH64638	Soybean	cytosol	58.39	26.36
CDY04674	Canola	cytosol	59.73	26.1
PGSC0003DMT400002306	Potato	cytosol	57.05	25.99
CDY08175	Canola	cytosol	59.73	25.87
Solyc11g012830.1.1	Tomato	cytosol	55.7	25.38
Zm00001d003661_P001	Maize	plastid	26.17	18.84
GSMUA_Achr6P17940_001	Banana	extracellular	4.7	7.22
Zm00001d003662_P001	Maize	extracellular, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	UniProt:A0A0N7KJ29	ProteinID:BAS89265.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0006417	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009409	GO:GO:0009628
GO:GO:0009987	GO:GO:0019538	GO:GO:0090406	InterPro:IPR001810	EnsemblPlantsGene:Os04g0431200	EnsemblPlants:Os04t0431200-01
PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR12874	PANTHER:PTHR12874:SF9	SMART:SM00256	SUPFAM:SSF81383
UniParc:UPI000224D030	:	:	:	:	:

Description

defense-related F-box protein 1, F-box protein 209Similar to OSIGBa0160I14.7 protein. (Os04t0431200-01)

Coordinates

chr4:+:21380985..21385639

Molecular Weight (calculated)

17557.3 Da

IEP (calculated)

10.176

GRAVY (calculated)

-0.295

Length

149 amino acids

Sequence
(BLAST)

001: MASSDVSVDV RPEFNSFDHL RSIRYIATDR PWLTLYGIRV QPVTPFSSLS SRPDLALIHQ CLPDELLFEI FARMSPYSLG RAACVCRKWK YTVRNPTLWR
101: NACLKTWQRT GMEANYQMVQ SLYDSSWRKM WMLRPRIQFD GISSRRILS

Best Arabidopsis Sequence Match ( AT1G21760.2 )
(BLAST)

001: MIGDALTIPS ELESALRLRT VQYFITKRPW LDLYGVHVRP VPPFGSTSRK PHFDPALIHR CLPDELLFEV FARMMPYDLG RASCVCRKWR YTVRNPMFWR
101: NACLKAWQTA GVIENYKILQ SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF LYKNSSQKLK DVAKYMNFKA
201: SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT
301: AFVFVPFEEV DESVLNLPPE KMDYYVTG

Arabidopsis Description

SKIP32F-box protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.