Factsheet for Zm00001d025421_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10826	Sorghum	cytosol	90.22	98.78
Zm00001d003661_P001	Maize	plastid	50.28	86.96
TraesCS2D01G302000.2	Wheat	cytosol	77.93	85.32
TraesCS2A01G303500.1	Wheat	cytosol	77.93	85.32
TraesCS2B01G320100.2	Wheat	cytosol	77.93	84.04
Zm00001d003662_P001	Maize	extracellular, mitochondrion	18.99	80.95
Os04t0431200-01	Rice	plastid	32.4	77.85
PGSC0003DMT400002306	Potato	cytosol	57.54	63.0
Solyc11g012830.1.1	Tomato	cytosol	56.98	62.39
KRH64638	Soybean	cytosol	56.7	61.52
KRH53264	Soybean	cytosol	55.87	60.79
VIT_18s0001g02630.t01	Wine grape	cytosol	55.59	60.67
AT1G21760.1	Thale cress	cytosol	55.03	60.06
Bra017949.1-P	Field mustard	cytosol	53.07	56.38
CDY04674	Canola	cytosol	53.07	55.72
CDY08175	Canola	cytosol	53.07	55.23
GSMUA_Achr6P17940_001	Banana	extracellular	13.13	48.45
PGSC0003DMT400017163	Potato	cytosol	8.1	37.18

Protein Annotations

EnsemblPlants:Zm00001d025421_P001	EnsemblPlants:Zm00001d025421_T001	EnsemblPlantsGene:Zm00001d025421	EntrezGene:100285517	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	PANTHER:PTHR12874	PANTHER:PTHR12874:SF9
PFAM:PF12937	PFscan:PS50181	ProteinID:AQK43709.1	SMART:SM00256	SUPFAM:SSF81383	UniParc:UPI000843D616
UniProt:A0A1D6J708	MapMan:19.2.2.8.1.4.6	:	:	:	:

Description

F-box protein 7

Coordinates

chr10:+:118144783..118151559

Molecular Weight (calculated)

41668.5 Da

IEP (calculated)

9.044

GRAVY (calculated)

-0.182

Length

358 amino acids

Sequence
(BLAST)

001: MASSDISVDI RPDINSFDHF LSMRYIATDR PWLKLYGIRV QPVPPFSSLS YKPDPALIHH CLPDELMLEI FTRMSPYTLG RAACVCRKWK YTARNPTLWR
101: AACLKTWQVS VFDFVIQFHV LMFSSIQFYV VKRSGMEANY MMVRSLYDSS WRRMWLQRPR IRIDGLYVSR NTYIHTGVTE WQFKKTVNVV CYYRYLRFFP
201: SGKFLYKVPI HNSHISPDKV KDAVKCMHFR ASKADCVFKG DYVLSEDGQI EMALLYPGHR YTLVRMHLRL RGTTVGANNR LDVLKILTTG VNATELQNWK
301: GSILELVEGW EEDETHDPDV PAVSHSRGLS PFVFVPFEEA DTSVLNLPVE KMDYYVPG

Best Arabidopsis Sequence Match ( AT1G21760.1 )
(BLAST)

001: MTSDALTIPS ELESALRLRT VQYFITKRPW LDLYGVHVRP VPPFGSTSRK PHFDPALIHR CLPDELLFEV FARMMPYDLG RASCVCRKWR YTVRNPMFWR
101: NACLKAWQTA GVIENYKILQ SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF LYKNSSQKLK DVAKYMNFKA
201: SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT
301: AFVFVPFEEV DESVLNLPPE KMDYYVTG

Arabidopsis Description

SKIP32F-box protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.