Factsheet for TraesCS2B01G320100.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G302000.2	Wheat	cytosol	97.59	99.08
TraesCS2A01G303500.1	Wheat	cytosol	97.29	98.78
EES10826	Sorghum	cytosol	84.04	85.32
Os04t0431200-01	Rice	plastid	35.24	78.52
Zm00001d025421_P001	Maize	cytosol	84.04	77.93
Zm00001d003661_P001	Maize	plastid	47.59	76.33
Zm00001d003662_P001	Maize	extracellular, mitochondrion	18.37	72.62
KRH64638	Soybean	cytosol	61.75	62.12
PGSC0003DMT400002306	Potato	cytosol	61.14	62.08
Solyc11g012830.1.1	Tomato	cytosol	60.84	61.77
KRH53264	Soybean	cytosol	60.84	61.4
AT1G21760.1	Thale cress	cytosol	59.94	60.67
VIT_18s0001g02630.t01	Wine grape	cytosol	59.04	59.76
Bra017949.1-P	Field mustard	cytosol	59.34	58.46
CDY04674	Canola	cytosol	59.34	57.77
CDY08175	Canola	cytosol	59.34	57.27
GSMUA_Achr6P17940_001	Banana	extracellular	15.06	51.55
PGSC0003DMT400017163	Potato	cytosol	9.94	42.31

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005739	GO:GO:0006412	GO:GO:0006417	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009408	GO:GO:0009409	GO:GO:0009628	GO:GO:0009987	GO:GO:0019538
GO:GO:0090406	InterPro:IPR001810	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR12874	PANTHER:PTHR12874:SF9
SMART:SM00256	SUPFAM:SSF81383	EnsemblPlantsGene:TraesCS2B01G320100	EnsemblPlants:TraesCS2B01G320100.2	:	:

Description

No Description!

Coordinates

chr2B:+:456172737..456176885

Molecular Weight (calculated)

38397.4 Da

IEP (calculated)

9.370

GRAVY (calculated)

-0.289

Length

332 amino acids

Sequence
(BLAST)

001: MASPDISIDI RPELNSFDHL RSTGYISTDR PWLKLYGIRV PPVSLFNSLS STPDLALIHQ CLPDELLIEI FGRMSPYTLG RAACVCRKWK YTTRNPTLWR
101: NACLKTWQRN GIEANFRMVQ SLYDSSWRKM WVQRPRIRID GLYVSRNTYI HTGITEWQFK KTVNVVCYYR YLRFFPTGKF LYKISPQKVK DVVKCMHLRA
201: SKGDSVFKGD YTLSGDGQIE MALLYPGHRY TLVRMRLRVR GTTIGANNRL DVLKILTTGV NGTELGNWKG NILELVEDWE ENETHDPDVP AVSHSRGLTP
301: FVFVPFEETC FFQADTSVLN LPVEKMDYFV PG

Best Arabidopsis Sequence Match ( AT1G21760.1 )
(BLAST)

001: MTSDALTIPS ELESALRLRT VQYFITKRPW LDLYGVHVRP VPPFGSTSRK PHFDPALIHR CLPDELLFEV FARMMPYDLG RASCVCRKWR YTVRNPMFWR
101: NACLKAWQTA GVIENYKILQ SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF LYKNSSQKLK DVAKYMNFKA
201: SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT
301: AFVFVPFEEV DESVLNLPPE KMDYYVTG

Arabidopsis Description

SKIP32F-box protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.