Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 4
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003662_P001 | Maize | extracellular, mitochondrion | 34.78 | 85.71 |
| EES10826 | Sorghum | cytosol | 85.99 | 54.43 |
| Zm00001d025421_P001 | Maize | cytosol | 86.96 | 50.28 |
| TraesCS2A01G303500.1 | Wheat | cytosol | 76.81 | 48.62 |
| TraesCS2D01G302000.2 | Wheat | cytosol | 76.33 | 48.32 |
| TraesCS2B01G320100.2 | Wheat | cytosol | 76.33 | 47.59 |
| PGSC0003DMT400002306 | Potato | cytosol | 60.87 | 38.53 |
| Solyc11g012830.1.1 | Tomato | cytosol | 60.39 | 38.23 |
| VIT_18s0001g02630.t01 | Wine grape | cytosol | 59.9 | 37.8 |
| KRH64638 | Soybean | cytosol | 59.42 | 37.27 |
| GSMUA_Achr6P17940_001 | Banana | extracellular | 17.39 | 37.11 |
| KRH53264 | Soybean | cytosol | 58.94 | 37.08 |
| AT1G21760.1 | Thale cress | cytosol | 56.52 | 35.67 |
| Bra017949.1-P | Field mustard | cytosol | 54.11 | 33.23 |
| CDY04674 | Canola | cytosol | 54.11 | 32.84 |
| CDY08175 | Canola | cytosol | 54.11 | 32.56 |
| Os04t0431200-01 | Rice | plastid | 18.84 | 26.17 |
| PGSC0003DMT400017163 | Potato | cytosol | 0.48 | 1.28 |
Protein Annotations
| EnsemblPlants:Zm00001d003661_P001 | EnsemblPlants:Zm00001d003661_T001 | EnsemblPlantsGene:Zm00001d003661 | PANTHER:PTHR12874 | PANTHER:PTHR12874:SF9 | ProteinID:ONM17436.1 |
| UniParc:UPI00084526FC | UniProt:A0A1D6EAP8 | MapMan:19.2.2.8.1.4.6 | : | : | : |
Description
F-box protein 7
Coordinates
chr2:-:52987764..52990026
Molecular Weight (calculated)
23960.1 Da
IEP (calculated)
8.039
GRAVY (calculated)
-0.173
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPYTLGRAA CVCLSCSYVF SSIQFYVMKR SGMEANHMMV RSLYDSSWRR MLLQRPRIRI DGLYVCYYRY LRFFPSGKFL YKISPDKIKD AVKCMHFRAS
101: KADCVFKSEY ILSEDGQIEM ALLYPGQWCT LVRMHLRLRV NATELQNWKG SILELVEGWE EDETHDPDAP AVSHSRGLSP SVFVPFEEAD TSVLNLPVEK
201: MGYYVPG
101: KADCVFKSEY ILSEDGQIEM ALLYPGQWCT LVRMHLRLRV NATELQNWKG SILELVEGWE EDETHDPDAP AVSHSRGLSP SVFVPFEEAD TSVLNLPVEK
201: MGYYVPG
001: MTSDALTIPS ELESALRLRT VQYFITKRPW LDLYGVHVRP VPPFGSTSRK PHFDPALIHR CLPDELLFEV FARMMPYDLG RASCVCRKWR YTVRNPMFWR
101: NACLKAWQTA GVIENYKILQ SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF LYKNSSQKLK DVAKYMNFKA
201: SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT
301: AFVFVPFEEV DESVLNLPPE KMDYYVTG
101: NACLKAWQTA GVIENYKILQ SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF LYKNSSQKLK DVAKYMNFKA
201: SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT
301: AFVFVPFEEV DESVLNLPPE KMDYYVTG
Arabidopsis Description
SKIP32F-box protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI00]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.