Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003662_P001 | Maize | extracellular, mitochondrion | 29.9 | 34.52 |
| Zm00001d003661_P001 | Maize | plastid | 37.11 | 17.39 |
| TraesCS2D01G302000.2 | Wheat | cytosol | 51.55 | 15.29 |
| TraesCS2A01G303500.1 | Wheat | cytosol | 51.55 | 15.29 |
| TraesCS2B01G320100.2 | Wheat | cytosol | 51.55 | 15.06 |
| GSMUA_Achr6P07230_001 | Banana | cytosol, plastid | 50.52 | 15.03 |
| EES10826 | Sorghum | cytosol | 47.42 | 14.07 |
| Zm00001d025421_P001 | Maize | cytosol | 48.45 | 13.13 |
| KRH53264 | Soybean | cytosol | 44.33 | 13.07 |
| KRH64638 | Soybean | cytosol | 44.33 | 13.03 |
| PGSC0003DMT400002306 | Potato | cytosol | 43.3 | 12.84 |
| Solyc11g012830.1.1 | Tomato | cytosol | 43.3 | 12.84 |
| VIT_18s0001g02630.t01 | Wine grape | cytosol | 42.27 | 12.5 |
| AT1G21760.1 | Thale cress | cytosol | 39.18 | 11.59 |
| Bra017949.1-P | Field mustard | cytosol | 40.21 | 11.57 |
| CDY04674 | Canola | cytosol | 40.21 | 11.44 |
| CDY08175 | Canola | cytosol | 40.21 | 11.34 |
| PGSC0003DMT400017163 | Potato | cytosol | 4.12 | 5.13 |
| Os04t0431200-01 | Rice | plastid | 7.22 | 4.7 |
| GSMUA_Achr6P17950_001 | Banana | mitochondrion | 5.15 | 3.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P17940_001 | EnsemblPlants:GSMUA_Achr6T17940_001 | EnsemblPlantsGene:GSMUA_Achr6G17940_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| TMHMM:TMhelix | UniParc:UPI000295CCE1 | UniProt:M0T7Z2 | MapMan:35.2 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G17940_001]
Coordinates
chr6:-:12095159..12095593
Molecular Weight (calculated)
11446.9 Da
IEP (calculated)
4.290
GRAVY (calculated)
0.510
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MQHLYISIVF VLFMWHGIFL QLFVLPLVYD IFLHLFDTHV IYEVNDHGDY MLRIVEGWEE NETHDPDVPA ISHSRGLTPF VFVPFEEVLL SIEGFIP
001: MTSDALTIPS ELESALRLRT VQYFITKRPW LDLYGVHVRP VPPFGSTSRK PHFDPALIHR CLPDELLFEV FARMMPYDLG RASCVCRKWR YTVRNPMFWR
101: NACLKAWQTA GVIENYKILQ SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF LYKNSSQKLK DVAKYMNFKA
201: SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT
301: AFVFVPFEEV DESVLNLPPE KMDYYVTG
101: NACLKAWQTA GVIENYKILQ SKYDGSWRKM WLLRSRVRTD GLYVSRNTYI RAGIAEWKIT NPVHIVCYYR YIRFYPSGRF LYKNSSQKLK DVAKYMNFKA
201: SKSENLYKGT YTLSMSDDKI EAAVLYPGTR PTVLRIRLRL RGTAIGANNR MDLLSLVTSG VNDEEISSTE EDILGLVEGW EDDETHNPDI PAVSHKRGMT
301: AFVFVPFEEV DESVLNLPPE KMDYYVTG
Arabidopsis Description
SKIP32F-box protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI00]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.