Factsheet for Os05t0141800-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	52.65	55.26
GSMUA_Achr3P22890_001	Banana	cytosol	51.53	55.22
VIT_05s0020g02370.t01	Wine grape	cytosol	48.47	49.71
KRH50975	Soybean	cytosol	45.68	47.4
KRH11332	Soybean	cytosol	45.68	46.86
Bra002194.1-P	Field mustard	cytosol	45.13	46.82
Bra006485.1-P	Field mustard	cytosol	44.85	46.53
Solyc06g054460.1.1	Tomato	cytosol	43.73	46.45
AT5G18930.1	Thale cress	cytosol	44.85	46.4
CDX70856	Canola	cytosol	44.85	46.4
CDX88906	Canola	cytosol	44.85	46.4
PGSC0003DMT400081774	Potato	cytosol	42.62	46.36
Solyc01g080380.2.1	Tomato	cytosol	42.62	46.36
CDX92572	Canola	cytosol	44.57	46.24
Bra023699.1-P	Field mustard	cytosol	45.4	46.18
KRH20949	Soybean	cytosol	44.85	46.0
KRH02157	Soybean	cytosol	45.13	45.89
PGSC0003DMT400079043	Potato	cytosol	42.9	45.83
CDY13929	Canola	cytosol	44.01	45.66
CDY47189	Canola	cytosol	42.34	43.68
Os02t0611200-01	Rice	cytosol	37.6	34.18
Os09t0424300-03	Rice	cytosol	36.49	33.42
Os04t0498600-01	Rice	cytosol	35.38	31.91

Protein Annotations

KEGG:00270+4.1.1.50	KEGG:00330+4.1.1.50	Gene3D:3.30.360.50	Gene3D:3.60.90.10	MapMan:8.2.1	ProteinID:AAS90647.1
ProteinID:AAS98431.1	ProteinID:BAS92205.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004014	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006557
GO:GO:0006596	GO:GO:0006597	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008295
GO:GO:0009058	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831	GO:GO:0099402	EnsemblPlantsGene:Os05g0141800
EnsemblPlants:Os05t0141800-00	PFAM:PF01536	PIRSF:PIRSF001355	ScanProsite:PS01336	PANTHER:PTHR11570	PANTHER:PTHR11570:SF1
UniProt:Q75KG4	InterPro:S-AdoMet_deCO2ase_CS	InterPro:S-AdoMet_deCO2ase_core	InterPro:S-AdoMet_decarboxylase	SUPFAM:SSF56276	TIGRFAMs:TIGR00535
UniParc:UPI00003589BD	SEG:seg	:	:	:	:

Description

S-ADENOSYLMETHIONINE DECARBOXYLASE 3Similar to S-adenosylmethionine decarboxylase proenzyme. (Os05t0141800-00)

Coordinates

chr5:-:2417277..2418356

Molecular Weight (calculated)

37843.6 Da

IEP (calculated)

6.366

GRAVY (calculated)

0.029

Length

359 amino acids

Sequence
(BLAST)

001: MASCGFEGFE KRLELVFELP ASGGEVARHG LRLLPAEALR EVLDAAQCAV VSAAGNAAAD AYVLSESSMF VYPGRVVLKT CGTTPLLRAV PVLLRAAAAL
101: RLRLRSCRYS RGEYLFPEAQ PFPHAHFADE VAYLDAALPR ELLRFRRSAV MPSSSSSSPG ASHRWHVYSA SSSASSSDAD GAARLTAEVC MTELDRGMAA
201: RFYQRPGDGR TSHAIGDEMT AASGIGGVVD ENDPRSLVCA YAFAPCGYSM NALDGARYAT VHVTPEDGHC YASFECATDD AAAALAAIRR AVAAFRPATV
301: SVSISHTSSA ASSLCTPVAE ALEPLGLACH CRAAEVFPGA GTVTYQTFTA PATKHEHDN

Best Arabidopsis Sequence Match ( AT3G02470.1 )
(BLAST)

001: MALSAIGFEG YEKRLEVTFF EPSIFQDSKG LGLRALTKSQ LDEILTPAAC TIVSSLSNDQ LDSYVLSESS FFVYPYKVII KTCGTTKLLL SIPPLLKLAG
101: ELSLSVKSVK YTRGSFLCPG GQPFPHRSFS EEVSVLDGHF TQLGLNSVAY LMGNDDETKK WHVYAASAQD SSNCNNNVYT LEMCMTGLDR EKAAVFYKDE
201: ADKTGSMTDN SGIRKILPKS EICDFEFEPC GYSMNSIEGD AISTIHVTPE DGFSYASFEA VGYDFNTLDL SQLVTRVLSC FEPKQFSVAV HSSVGANSYK
301: PEITVDLEDY GCRERTFESL GEESGTVMYQ TFEKLGKYCG SPRSTLKCEW SSNNSCSSED EKDEGI

Arabidopsis Description

SAMDC1S-adenosylmethionine decarboxylase proenzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.