Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023699.1-P | Field mustard | cytosol | 94.25 | 92.92 |
| CDX70856 | Canola | cytosol | 83.91 | 84.15 |
| AT5G18930.1 | Thale cress | cytosol | 82.76 | 83.0 |
| CDX88906 | Canola | cytosol | 81.03 | 81.27 |
| CDX92572 | Canola | cytosol | 80.17 | 80.64 |
| CDY13929 | Canola | cytosol | 79.89 | 80.35 |
| VIT_05s0020g02370.t01 | Wine grape | cytosol | 59.77 | 59.43 |
| PGSC0003DMT400081774 | Potato | cytosol | 54.02 | 56.97 |
| Solyc01g080380.2.1 | Tomato | cytosol | 53.16 | 56.06 |
| KRH02157 | Soybean | cytosol | 55.75 | 54.96 |
| KRH50975 | Soybean | cytosol | 54.6 | 54.91 |
| PGSC0003DMT400079043 | Potato | cytosol | 52.87 | 54.76 |
| KRH20949 | Soybean | cytosol | 54.31 | 54.0 |
| KRH11332 | Soybean | cytosol | 54.31 | 54.0 |
| Solyc06g054460.1.1 | Tomato | cytosol | 51.72 | 53.25 |
| GSMUA_Achr11P... | Banana | cytosol | 50.0 | 50.88 |
| GSMUA_Achr3P22890_001 | Banana | cytosol | 48.56 | 50.45 |
| Os05t0141800-00 | Rice | cytosol | 43.68 | 42.34 |
| CDX91992 | Canola | cytosol | 39.66 | 37.6 |
| CDY71278 | Canola | cytosol | 39.08 | 37.47 |
| CDY57536 | Canola | cytosol | 39.08 | 37.36 |
| CDX74257 | Canola | cytosol | 39.08 | 36.96 |
| CDX69487 | Canola | cytosol | 37.93 | 35.87 |
| CDY26478 | Canola | cytosol | 37.64 | 35.69 |
| CDX70666 | Canola | cytosol | 36.49 | 34.99 |
| CDX78666 | Canola | cytosol | 29.02 | 33.44 |
| CDY71710 | Canola | cytosol, nucleus, plastid | 39.08 | 31.7 |
| CDY49835 | Canola | cytosol | 28.74 | 30.58 |
| CDY43235 | Canola | cytosol, plastid | 38.79 | 29.16 |
| CDY54323 | Canola | cytosol, nucleus, plastid | 6.61 | 20.72 |
| CDX85819 | Canola | cytosol | 6.9 | 18.75 |
| CDY63462 | Canola | plastid | 6.03 | 13.64 |
| CDY33352 | Canola | plastid | 5.75 | 12.99 |
| CDY06772 | Canola | nucleus | 6.03 | 12.88 |
| CDX99815 | Canola | cytosol | 5.75 | 10.87 |
| CDY17081 | Canola | cytosol | 5.75 | 10.7 |
| CDX84130 | Canola | cytosol | 3.74 | 10.4 |
Protein Annotations
| KEGG:00270+4.1.1.50 | KEGG:00330+4.1.1.50 | Gene3D:3.30.360.50 | Gene3D:3.60.90.10 | MapMan:8.2.1 | GO:A0A078ICX3 |
| UniProt:A0A078ICX3 | EnsemblPlants:CDY47189 | ProteinID:CDY47189 | ProteinID:CDY47189.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004014 | GO:GO:0006139 | GO:GO:0006557 | GO:GO:0006596 | GO:GO:0006597 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008295 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016831 |
| EnsemblPlantsGene:GSBRNA2T00086894001 | PFAM:PF01536 | PIRSF:PIRSF001355 | ScanProsite:PS01336 | PANTHER:PTHR11570 | PANTHER:PTHR11570:SF1 |
| MetaCyc:PWY-6834 | InterPro:S-AdoMet_deCO2ase_CS | InterPro:S-AdoMet_deCO2ase_core | InterPro:S-AdoMet_decarboxylase | SUPFAM:SSF56276 | TIGRFAMs:TIGR00535 |
| UniPathway:UPA00331 | UniParc:UPI0004EDCFB0 | SEG:seg | : | : | : |
Description
BnaAnng08590DS-adenosylmethionine decarboxylase proenzyme [Source:UniProtKB/TrEMBL;Acc:A0A078ICX3]
Coordinates
chrLK032702:-:42574..43620
Molecular Weight (calculated)
38872.7 Da
IEP (calculated)
5.114
GRAVY (calculated)
-0.255
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MIYTSINYSW SEFNIEPPPG LRLIDFESLD QVLNEVQCTV VSAVANHSFD AYVLSESSLF VYPTKIIIKT CGTTQLLKSI RPFIHLARTL SLTLRACRYS
101: RGSFIFPKAQ PFPYTSFKDE VVIVEESLPN SLRYRKASVM TPSNNNNNPS RAWHVFTASA DVEPDEPLVV VEVCMTELDR VNARSFFRRK GDGKNSDSAG
201: KEMTRLSGID TINANAFICD FAFDPCGYSM NGVDGDRYST IHVTPEDGFS YASFECGLSL YDDGHGDISE VLTRAIDVFR PDCVSVATTY GGEDYSHEVT
301: KRVERMLAKK LGLTCRSRLV DEFPGSGTVV FQSFTPRRQY SSPEGGEQ
101: RGSFIFPKAQ PFPYTSFKDE VVIVEESLPN SLRYRKASVM TPSNNNNNPS RAWHVFTASA DVEPDEPLVV VEVCMTELDR VNARSFFRRK GDGKNSDSAG
201: KEMTRLSGID TINANAFICD FAFDPCGYSM NGVDGDRYST IHVTPEDGFS YASFECGLSL YDDGHGDISE VLTRAIDVFR PDCVSVATTY GGEDYSHEVT
301: KRVERMLAKK LGLTCRSRLV DEFPGSGTVV FQSFTPRRQY SSPEGGEQ
001: MAVSGFEGFE KRLELRFFDD DKPITKNPMG LRLIDFESLD QVLNEVQCTV VSAVANRSFD AYVLSESSLF VYPTKIIIKT CGTTQLLKSI RPLIHLARNL
101: GLTLRACRYS RGSFIFPKAQ PFPYTSFKDE VIVVEESLPK SLCYRKASVM TPSNNPSRAW HVFTASADVE SDEHVVVVEV CMTELDRVNA RSFFKRKGDE
201: KNNSDSAGKE MTRLSGIDNI NANAYICDFA FDPCGYSMNG VDGDRYSTIH VTPEDGFSYA SFECGLSLYD NGHEDISEVL SRAIDVFRPS DVSIATTYGG
301: EDYNHEVTKR VERVLAKKLD LKCRSRLMDE FPGSGTVVYQ SFTPRRK
101: GLTLRACRYS RGSFIFPKAQ PFPYTSFKDE VIVVEESLPK SLCYRKASVM TPSNNPSRAW HVFTASADVE SDEHVVVVEV CMTELDRVNA RSFFKRKGDE
201: KNNSDSAGKE MTRLSGIDNI NANAYICDFA FDPCGYSMNG VDGDRYSTIH VTPEDGFSYA SFECGLSLYD NGHEDISEVL SRAIDVFRPS DVSIATTYGG
301: EDYNHEVTKR VERVLAKKLD LKCRSRLMDE FPGSGTVVYQ SFTPRRK
Arabidopsis Description
SAMDC4S-adenosylmethionine decarboxylase proenzyme 4 [Source:UniProtKB/Swiss-Prot;Acc:Q3E9D5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.