Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008662.1-P | Field mustard | cytosol | 95.92 | 95.92 |
| CDY26478 | Canola | cytosol | 92.12 | 92.37 |
| AT5G15950.2 | Thale cress | cytosol | 86.41 | 87.85 |
| CDX78666 | Canola | cytosol | 70.11 | 85.43 |
| CDX70666 | Canola | cytosol | 82.07 | 83.2 |
| CDY71278 | Canola | cytosol | 78.26 | 79.34 |
| CDX74257 | Canola | cytosol | 78.26 | 78.26 |
| CDX91992 | Canola | cytosol | 77.99 | 78.2 |
| CDY57536 | Canola | cytosol | 76.09 | 76.92 |
| CDY71710 | Canola | cytosol, nucleus, plastid | 77.99 | 66.9 |
| KRH01466 | Soybean | cytosol, golgi, nucleus | 61.41 | 62.95 |
| KRH45175 | Soybean | cytosol | 61.14 | 62.67 |
| Solyc02g089610.1.1 | Tomato | cytosol | 61.14 | 62.15 |
| PGSC0003DMT400026053 | Potato | cytosol | 60.87 | 61.88 |
| CDY43235 | Canola | cytosol, plastid | 76.63 | 60.91 |
| VIT_14s0083g00580.t01 | Wine grape | cytosol | 60.6 | 55.06 |
| TraesCS6A01G219500.1 | Wheat | cytosol | 50.0 | 47.42 |
| HORVU6Hr1G056110.1 | Barley | cytosol | 50.0 | 47.3 |
| TraesCS5D01G228900.1 | Wheat | cytosol, nucleus, peroxisome | 50.27 | 47.19 |
| TraesCS5B01G220000.1 | Wheat | cytosol, nucleus, peroxisome | 50.27 | 47.19 |
| TraesCS6B01G249000.1 | Wheat | cytosol | 49.73 | 47.16 |
| TraesCS6D01G202500.1 | Wheat | cytosol | 49.73 | 47.16 |
| TraesCS5A01G221200.1 | Wheat | cytosol | 50.27 | 46.95 |
| EER98924 | Sorghum | cytosol | 50.27 | 46.84 |
| TraesCS2B01G372900.1 | Wheat | cytosol | 49.46 | 46.55 |
| EES05409 | Sorghum | plastid | 50.27 | 46.48 |
| Zm00001d020543_P001 | Maize | cytosol | 49.46 | 46.43 |
| Os09t0424300-03 | Rice | cytosol | 49.46 | 46.43 |
| Zm00001d051056_P001 | Maize | plastid | 49.73 | 46.33 |
| Os02t0611200-01 | Rice | cytosol | 49.46 | 46.08 |
| Os04t0498600-01 | Rice | cytosol | 49.73 | 45.98 |
| Zm00001d025773_P002 | Maize | cytosol, plastid | 48.91 | 45.8 |
| GSMUA_Achr9P18460_001 | Banana | cytosol | 52.45 | 45.41 |
| Zm00001d003157_P001 | Maize | cytosol | 48.91 | 45.0 |
| TraesCS2A01G355400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 49.18 | 43.61 |
| TraesCS2D01G352900.1 | Wheat | cytosol | 48.1 | 43.28 |
| HORVU5Hr1G064040.8 | Barley | cytosol | 50.27 | 41.86 |
| HORVU2Hr1G086140.5 | Barley | cytosol | 49.46 | 40.44 |
| CDX92572 | Canola | cytosol | 37.77 | 40.17 |
| OQU81878 | Sorghum | cytosol | 49.46 | 40.0 |
| CDY13929 | Canola | cytosol | 37.5 | 39.88 |
| CDX88906 | Canola | cytosol | 36.96 | 39.19 |
| CDY49835 | Canola | cytosol | 34.78 | 39.14 |
| CDX70856 | Canola | cytosol | 36.68 | 38.9 |
| CDY47189 | Canola | cytosol | 35.87 | 37.93 |
| CDY54323 | Canola | cytosol, nucleus, plastid | 7.34 | 24.32 |
| CDX85819 | Canola | cytosol | 7.88 | 22.66 |
| CDY63462 | Canola | plastid | 9.24 | 22.08 |
| CDY33352 | Canola | plastid | 8.97 | 21.43 |
| CDY06772 | Canola | nucleus | 8.97 | 20.25 |
| CDX99815 | Canola | cytosol | 8.42 | 16.85 |
| CDY17081 | Canola | cytosol | 8.42 | 16.58 |
| CDX84130 | Canola | cytosol | 5.16 | 15.2 |
Protein Annotations
| KEGG:00270+4.1.1.50 | KEGG:00330+4.1.1.50 | Gene3D:3.30.360.50 | Gene3D:3.60.90.10 | MapMan:8.2.1 | GO:A0A078BYP4 |
| EnsemblPlants:CDX69487 | ProteinID:CDX69487 | ProteinID:CDX69487.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004014 |
| GO:GO:0006139 | GO:GO:0006557 | GO:GO:0006597 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008295 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00135480001 | PFAM:PF01536 | PIRSF:PIRSF001355 | ScanProsite:PS01336 |
| PANTHER:PTHR11570 | PANTHER:PTHR11570:SF14 | MetaCyc:PWY-6834 | InterPro:S-AdoMet_deCO2ase_CS | InterPro:S-AdoMet_deCO2ase_core | InterPro:S-AdoMet_decarboxylase |
| SUPFAM:SSF56276 | TIGRFAMs:TIGR00535 | UniPathway:UPA00331 | UniParc:UPI0004EF3983 | SEG:seg | : |
Description
BnaA10g18360D
Coordinates
chrLK031790:-:457711..458960
Molecular Weight (calculated)
40541.5 Da
IEP (calculated)
4.473
GRAVY (calculated)
-0.247
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLSAIGFEG YEKRLEVSFF EPSLFLDTHG KGLRALSKSQ IDEILAPAEC TIVSSLSNDE LDSYVLSESS LFIFPYKIII KTCGTTKLLL SIEPLLRLSG
101: GVSLEVKSVR YTRGSFLCPG GQPFPHRNFS EEVSVLDGHF AKMGLSSVAY LMGDDDETKK WHVYSASAPA KNSNSDNNVY TLEMCMTGLD KDKASVFFKN
201: ESSSAGSMTD NSGIRKILPQ SQICDFEFEP CGYSMNSVEG DAISTIHVTP EDGFSYASFE AVGYDFTTMD LSHLVSRVLT CFEPKQFSVA VNSSVAQKSY
301: DHSGLSVDLE DYGCRETTVE SLGEERGTVM YQRFEKLGMY CGSPRSTLKC EWSSNSSCTS EDEKEEGI
101: GVSLEVKSVR YTRGSFLCPG GQPFPHRNFS EEVSVLDGHF AKMGLSSVAY LMGDDDETKK WHVYSASAPA KNSNSDNNVY TLEMCMTGLD KDKASVFFKN
201: ESSSAGSMTD NSGIRKILPQ SQICDFEFEP CGYSMNSVEG DAISTIHVTP EDGFSYASFE AVGYDFTTMD LSHLVSRVLT CFEPKQFSVA VNSSVAQKSY
301: DHSGLSVDLE DYGCRETTVE SLGEERGTVM YQRFEKLGMY CGSPRSTLKC EWSSNSSCTS EDEKEEGI
001: MAMSAIGFEG YEKRLEVTFF EPGLFLDTQG KGLRALAKSQ IDEILQPAEC TIVSSLSNDQ LDSYVLSESS LFIFPYKIVI KTCGTTKLLL SIEPLLRLAG
101: ELSLDVKAVR YTRGSFLCPG GQPFPHRNFS EEVSVLDGHF AKLGLSSVAY LMGNDDETKK WHVYSASSAN SNNKNNVYTL EMCMTGLDKD KASVFYKNES
201: SSAGSMTDNS GIRKILPQSQ ICDFEFEPCG YSMNSIEGDA ISTIHVTPED GFSYASFEAV GYDFTTMDLS HLVSKVLTCF KPKQFSVAVH STVAQKSYDS
301: GLSVDLDDYG CKESTMESLG EERGTVMYQR FEKLGRYCGS PRSTLKCEWS SNSSCNSEDE KE
101: ELSLDVKAVR YTRGSFLCPG GQPFPHRNFS EEVSVLDGHF AKLGLSSVAY LMGNDDETKK WHVYSASSAN SNNKNNVYTL EMCMTGLDKD KASVFYKNES
201: SSAGSMTDNS GIRKILPQSQ ICDFEFEPCG YSMNSIEGDA ISTIHVTPED GFSYASFEAV GYDFTTMDLS HLVSKVLTCF KPKQFSVAVH STVAQKSYDS
301: GLSVDLDDYG CKESTMESLG EERGTVMYQR FEKLGRYCGS PRSTLKCEWS SNSSCNSEDE KE
Arabidopsis Description
SAMDC2S-adenosylmethionine decarboxylase proenzyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.