Factsheet for HORVU2Hr1G086140.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G372900.1	Wheat	cytosol	84.67	97.44
TraesCS2D01G352900.1	Wheat	cytosol	86.67	95.35
TraesCS2A01G355400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	84.67	91.81
Os04t0498600-01	Rice	cytosol	70.89	80.15
Zm00001d003157_P001	Maize	cytosol	70.67	79.5
OQU81878	Sorghum	cytosol	77.56	76.7
Zm00001d025773_P002	Maize	cytosol, plastid	66.67	76.34
HORVU6Hr1G056110.1	Barley	cytosol	62.22	71.98
GSMUA_Achr9P13400_001	Banana	cytosol	53.33	66.67
GSMUA_Achr5P24230_001	Banana	cytosol, peroxisome, plastid	57.33	65.15
GSMUA_Achr3P04790_001	Banana	cytosol	53.33	64.34
GSMUA_Achr7P19450_001	Banana	cytosol, plastid	53.78	63.19
HORVU5Hr1G064040.8	Barley	cytosol	61.11	62.22
Solyc01g010050.2.1	Tomato	cytosol	44.67	55.22
PGSC0003DMT400041339	Potato	cytosol	44.44	55.1
Solyc02g089610.1.1	Tomato	cytosol	44.22	54.97
PGSC0003DMT400026053	Potato	cytosol	44.0	54.7
PGSC0003DMT400019451	Potato	cytosol	43.56	54.44
AT3G25570.2	Thale cress	cytosol	42.22	54.44
Solyc05g010420.1.1	Tomato	cytosol	43.11	53.89
VIT_11s0037g00950.t01	Wine grape	cytosol	45.78	53.23
AT5G15950.2	Thale cress	cytosol	41.11	51.1
CDY71278	Canola	cytosol	40.67	50.41
KRH02991	Soybean	cytosol	40.0	50.28
Bra008662.1-P	Field mustard	cytosol	41.11	50.27
AT3G02470.1	Thale cress	cytosol	40.67	50.0
CDX74257	Canola	cytosol	40.67	49.73
CDY57536	Canola	cytosol	40.22	49.73
Bra039176.1-P	Field mustard	cytosol	40.22	49.73
CDY26478	Canola	cytosol	40.44	49.59
CDX91992	Canola	cytosol	40.44	49.59
CDX69487	Canola	cytosol	40.44	49.46
CDY71710	Canola	cytosol, nucleus, plastid	46.44	48.72
Bra006334.1-P	Field mustard	cytosol	32.67	48.68
CDX70666	Canola	cytosol	39.11	48.48
Bra021458.1-P	Field mustard	nucleus	46.22	48.48
CDX78666	Canola	cytosol	32.44	48.34
Bra001046.1-P	Field mustard	nucleus	47.56	48.2
CDY43235	Canola	cytosol, plastid	46.44	45.14
AT3G17717.1	Thale cress	cytosol	11.78	41.73
CDY33352	Canola	plastid	11.78	34.42
Bra021271.1-P	Field mustard	cytosol	24.44	33.64
CDY63462	Canola	plastid	11.33	33.12
CDY49835	Canola	cytosol	24.0	33.03
CDX99815	Canola	cytosol	11.78	28.8
CDY17081	Canola	cytosol	11.78	28.34
CDY06772	Canola	nucleus	10.22	28.22

Protein Annotations

KEGG:00270+4.1.1.50	KEGG:00330+4.1.1.50	Gene3D:3.30.360.50	Gene3D:3.60.90.10	MapMan:8.2.1	UniProt:A0A287IS41
InterPro:AdoMetDC_leader	GO:GO:0003674	GO:GO:0003824	GO:GO:0004014	GO:GO:0006139	GO:GO:0006557
GO:GO:0006596	GO:GO:0006597	GO:GO:0008150	GO:GO:0008152	GO:GO:0008295	GO:GO:0009058
GO:GO:0009987	GO:GO:0016829	EnsemblPlantsGene:HORVU2Hr1G086140	EnsemblPlants:HORVU2Hr1G086140.5	PFAM:PF01536	PFAM:PF08132
ScanProsite:PS01336	PANTHER:PTHR11570	PANTHER:PTHR11570:SF3	InterPro:S-AdoMet_deCO2ase_CS	InterPro:S-AdoMet_deCO2ase_core	InterPro:S-AdoMet_decarboxylase
SUPFAM:SSF56276	TIGRFAMs:TIGR00535	UniParc:UPI000B4730BE	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:621114767..621116361

Molecular Weight (calculated)

48913.2 Da

IEP (calculated)

4.948

GRAVY (calculated)

-0.101

Length

450 amino acids

Sequence
(BLAST)

001: MESKGGKKSS SSSSLMYEAP LGYSIEDVRP AGGAKKFSAA YSNCAKKPSC FLTQTATMAA PTSAIGFEGY EKRLEITFNE ASIFADPHGR GLRALSRAQI
101: DSVLDLARCT IVSELSNKDF DSYVLSESSL FIYSQKIVIK TCGTTMLLLT IPRILELAEE LCMPLAAVKY SRGMFIFPGA QPAPHRSFSE EVDVLNRYFG
201: HLKSGGNAYV IGDPAKPGQK WHIYYATEQP EQPMVTLEMC MTGLDKKKAS VFFKTSADGH VSCAKEMTKL SGISNIIPEM EVCDFDFEPC GYSMNAINGS
301: AFSTIHVTPE DGFSYASYEV QGMDASALVY GDIVKRVLRC FGPSEFSVAV TIFGGRGHAA TWGKKLDAEA YDCNNIVEQE LPCGGVLIYQ SFTANEEVAV
401: SAGSPRSVFH CFEGENVESG HPLVKEGKLA NLLAWRAEED SLEEGAVLCE

Best Arabidopsis Sequence Match ( AT3G02470.1 )
(BLAST)

001: MALSAIGFEG YEKRLEVTFF EPSIFQDSKG LGLRALTKSQ LDEILTPAAC TIVSSLSNDQ LDSYVLSESS FFVYPYKVII KTCGTTKLLL SIPPLLKLAG
101: ELSLSVKSVK YTRGSFLCPG GQPFPHRSFS EEVSVLDGHF TQLGLNSVAY LMGNDDETKK WHVYAASAQD SSNCNNNVYT LEMCMTGLDR EKAAVFYKDE
201: ADKTGSMTDN SGIRKILPKS EICDFEFEPC GYSMNSIEGD AISTIHVTPE DGFSYASFEA VGYDFNTLDL SQLVTRVLSC FEPKQFSVAV HSSVGANSYK
301: PEITVDLEDY GCRERTFESL GEESGTVMYQ TFEKLGKYCG SPRSTLKCEW SSNNSCSSED EKDEGI

Arabidopsis Description

SAMDC1S-adenosylmethionine decarboxylase proenzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:Q96286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.