Factsheet for GSMUA_Achr7P19450_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13400_001	Banana	cytosol	70.5	75.0
GSMUA_Achr5P24230_001	Banana	cytosol, peroxisome, plastid	76.24	73.74
GSMUA_Achr3P04790_001	Banana	cytosol	69.19	71.05
Os09t0424300-03	Rice	cytosol	67.89	66.33
EER98924	Sorghum	cytosol	67.89	65.82
TraesCS5B01G220000.1	Wheat	cytosol, nucleus, peroxisome	67.1	65.56
TraesCS5D01G228900.1	Wheat	cytosol, nucleus, peroxisome	66.32	64.8
TraesCS5A01G221200.1	Wheat	cytosol	66.58	64.72
Os02t0611200-01	Rice	cytosol	66.58	64.56
Zm00001d020543_P001	Maize	cytosol	65.54	64.03
TraesCS6D01G202500.1	Wheat	cytosol	63.71	62.89
Os04t0498600-01	Rice	cytosol	65.27	62.81
Zm00001d051056_P001	Maize	plastid	64.75	62.78
TraesCS2B01G372900.1	Wheat	cytosol	63.71	62.4
TraesCS6B01G249000.1	Wheat	cytosol	62.92	62.11
EES05409	Sorghum	plastid	64.49	62.06
TraesCS6A01G219500.1	Wheat	cytosol	62.66	61.86
Zm00001d025773_P002	Maize	cytosol, plastid	63.45	61.83
HORVU6Hr1G056110.1	Barley	cytosol	62.4	61.44
Zm00001d003157_P001	Maize	cytosol	63.45	60.75
TraesCS2A01G355400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.97	59.04
TraesCS2D01G352900.1	Wheat	cytosol	62.66	58.68
HORVU5Hr1G064040.8	Barley	cytosol	66.84	57.92
VIT_11s0037g00950.t01	Wine grape	cytosol	56.92	56.33
OQU81878	Sorghum	cytosol	63.97	53.85
HORVU2Hr1G086140.5	Barley	cytosol	63.19	53.78
KRH02991	Soybean	cytosol	47.26	50.56
GSMUA_Achr9P18460_001	Banana	cytosol	46.48	41.88
GSMUA_Achr3P22890_001	Banana	cytosol	34.2	39.1
GSMUA_Achr11P...	Banana	cytosol	34.2	38.3

Protein Annotations

KEGG:00270+4.1.1.50	KEGG:00330+4.1.1.50	Gene3D:3.30.360.50	Gene3D:3.60.90.10	MapMan:8.2.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004014	GO:GO:0006139	GO:GO:0006557	GO:GO:0006596	GO:GO:0006597
GO:GO:0008150	GO:GO:0008152	GO:GO:0008295	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
GO:GO:0016831	EnsemblPlantsGene:GSMUA_Achr7G19450_001	EnsemblPlants:GSMUA_Achr7P19450_001	EnsemblPlants:GSMUA_Achr7T19450_001	UniProt:M0TIY2	PFAM:PF01536
PIRSF:PIRSF001355	ScanProsite:PS01336	PANTHER:PTHR11570	PANTHER:PTHR11570:SF3	InterPro:S-AdoMet_deCO2ase_CS	InterPro:S-AdoMet_deCO2ase_core
InterPro:S-AdoMet_decarboxylase	SUPFAM:SSF56276	TIGRFAMs:TIGR00535	UniParc:UPI0002965E64	SEG:seg	:

Description

S-adenosylmethionine decarboxylase proenzyme [Source:GMGC_GENE;Acc:GSMUA_Achr7G19450_001]

Coordinates

chr7:-:22273985..22275340

Molecular Weight (calculated)

42062.0 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.132

Length

383 amino acids

Sequence
(BLAST)

001: MNGSPSPPSV SPIGFEGYEK RLEITFSEAP TFVDPRGRGL RSLSREQIDS ILDLARCTVV SQLSNSEFDS YVLSESSLFV YPYKIILKTC GTTKLLLSIP
101: RILELAMELS LAVLSAKYSR GTFNFPGAQP SPHRSFAEEV AVLNQFFGSL NSGGNAYVMG DPTKPNRKWH IYYATQKAEL PMVTLEMCMT GLNTERASIF
201: FNNSVDGYSS AKEMTKFSGI SDIISEMDVC DFAFEPCGYS MNGIHGPALS TIHVTPEEGF SYASYEAMGF NPSSLVYSGL IKRVLKCFGP SKFSTAVTIF
301: GRHGLSGTWG RKLDLDGYAC TDLVEQELPG GGLLIYQAFA VSAVTVVSPR SILHSCDRDL KYDNRGIHWE NEETEGEEPK IGS

Best Arabidopsis Sequence Match ( AT3G25570.2 )
(BLAST)

001: MAVSATGFEG FEKRLEISFF ETTDFLDPQG KSLRSLTKSQ LDEILTPAEC TIVSSLTNSF VDSYVLSESS LFVYPYKIII KTCGTTKLLL SIPHILRLAD
101: SLCLTVKSVR YTRGSFIFPG AQSYPHRSFS EEVALLDDYF GKLNAGSKAF VMGGSDNNPQ RWHVYSASST EESAVCDKPV YTLEMCMTGL DNIKASVFFK
201: TNSVSASEMT ISSGIRNILP GSEICDFNFE PCGYSMNSIE GDAVSTIHVT PEDGFSYASF ETVGYDLKAL NFKELVDRVL VCFGPEEFSV AVHANLGTEV
301: LASDCVADVN GYFSQERELE ELGLGGSVLY QRFVKTVECC SPKSTLGFC

Arabidopsis Description

SAMDC3S-adenosylmethionine decarboxylase proenzyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSU6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.