Factsheet for GSMUA_Achr3P04790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13400_001	Banana	cytosol	77.21	80.0
GSMUA_Achr5P24230_001	Banana	cytosol, peroxisome, plastid	74.8	70.45
GSMUA_Achr7P19450_001	Banana	cytosol, plastid	71.05	69.19
TraesCS5B01G220000.1	Wheat	cytosol, nucleus, peroxisome	67.56	64.29
TraesCS5A01G221200.1	Wheat	cytosol	67.83	64.21
Os09t0424300-03	Rice	cytosol	67.29	64.03
EER98924	Sorghum	cytosol	67.56	63.8
TraesCS5D01G228900.1	Wheat	cytosol, nucleus, peroxisome	67.02	63.78
Os02t0611200-01	Rice	cytosol	66.76	63.04
Zm00001d020543_P001	Maize	cytosol	65.42	62.24
Zm00001d025773_P002	Maize	cytosol, plastid	64.88	61.58
TraesCS2B01G372900.1	Wheat	cytosol	64.34	61.38
TraesCS6B01G249000.1	Wheat	cytosol	63.54	61.08
HORVU6Hr1G056110.1	Barley	cytosol	63.54	60.93
TraesCS6A01G219500.1	Wheat	cytosol	63.27	60.82
TraesCS6D01G202500.1	Wheat	cytosol	63.27	60.82
Os04t0498600-01	Rice	cytosol	64.88	60.8
EES05409	Sorghum	plastid	63.81	59.8
Zm00001d003157_P001	Maize	cytosol	64.08	59.75
Zm00001d051056_P001	Maize	plastid	62.47	58.99
TraesCS2D01G352900.1	Wheat	cytosol	63.27	57.7
TraesCS2A01G355400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	63.81	57.35
HORVU5Hr1G064040.8	Barley	cytosol	67.56	57.01
OQU81878	Sorghum	cytosol	65.15	53.41
HORVU2Hr1G086140.5	Barley	cytosol	64.34	53.33
VIT_11s0037g00950.t01	Wine grape	cytosol	54.42	52.45
KRH02991	Soybean	cytosol	46.65	48.6
GSMUA_Achr9P18460_001	Banana	cytosol	47.19	41.41
GSMUA_Achr3P22890_001	Banana	cytosol	34.05	37.91
GSMUA_Achr11P...	Banana	cytosol	34.58	37.72

Protein Annotations

KEGG:00270+4.1.1.50	KEGG:00330+4.1.1.50	Gene3D:3.30.360.50	Gene3D:3.60.90.10	MapMan:8.2.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004014	GO:GO:0006139	GO:GO:0006557	GO:GO:0006596	GO:GO:0006597
GO:GO:0008150	GO:GO:0008152	GO:GO:0008295	GO:GO:0009058	GO:GO:0009987	GO:GO:0016829
GO:GO:0016831	EnsemblPlantsGene:GSMUA_Achr3G04790_001	EnsemblPlants:GSMUA_Achr3P04790_001	EnsemblPlants:GSMUA_Achr3T04790_001	UniProt:M0SBU7	PFAM:PF01536
PIRSF:PIRSF001355	ScanProsite:PS01336	PANTHER:PTHR11570	PANTHER:PTHR11570:SF3	InterPro:S-AdoMet_deCO2ase_CS	InterPro:S-AdoMet_deCO2ase_core
InterPro:S-AdoMet_decarboxylase	SUPFAM:SSF56276	TIGRFAMs:TIGR00535	UniParc:UPI000295416B	SEG:seg	:

Description

S-adenosylmethionine decarboxylase proenzyme [Source:GMGC_GENE;Acc:GSMUA_Achr3G04790_001]

Coordinates

chr3:-:3113859..3115296

Molecular Weight (calculated)

41173.3 Da

IEP (calculated)

5.877

GRAVY (calculated)

0.002

Length

373 amino acids

Sequence
(BLAST)

001: MALSLVDSLL ASPIGFEGYE KRLEITFSEP SIFLDPHGWG LRALSRPQID SILDLARCTI VSQLSNNVFD SYVLSESSLF IYPYKLILKT CGTTKLLLSI
101: PRILELAAEL SLSILSARYS RGTFIFPGAQ QSPHRSFSEE VVVLNQFFGS LKSSGNAYVL GGSTNANRKW HIYYATEKPE LPMVTLEMCM TGLNTDRALI
201: FYKNSAECHS SSAKKMTEIS GISNIIPEME ICDFEFEPCG YSMNGIHGPA LSTIHVTPEK GFSYASYEAM GFNSLTLVYQ DLVERVLRCF GPSEFSVAVT
301: ILGDRGLAGT WAEKIHLDGY TCKDRVDQEL PGGGLSIYQM FAASAVTAVS PRSTLPYWEG KYVDRTAKDH AKG

Best Arabidopsis Sequence Match ( AT3G25570.2 )
(BLAST)

001: MAVSATGFEG FEKRLEISFF ETTDFLDPQG KSLRSLTKSQ LDEILTPAEC TIVSSLTNSF VDSYVLSESS LFVYPYKIII KTCGTTKLLL SIPHILRLAD
101: SLCLTVKSVR YTRGSFIFPG AQSYPHRSFS EEVALLDDYF GKLNAGSKAF VMGGSDNNPQ RWHVYSASST EESAVCDKPV YTLEMCMTGL DNIKASVFFK
201: TNSVSASEMT ISSGIRNILP GSEICDFNFE PCGYSMNSIE GDAVSTIHVT PEDGFSYASF ETVGYDLKAL NFKELVDRVL VCFGPEEFSV AVHANLGTEV
301: LASDCVADVN GYFSQERELE ELGLGGSVLY QRFVKTVECC SPKSTLGFC

Arabidopsis Description

SAMDC3S-adenosylmethionine decarboxylase proenzyme 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSU6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.