Factsheet for Bra008662.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69487	Canola	cytosol	95.92	95.92
AT5G15950.2	Thale cress	cytosol	88.04	89.5
Bra006334.1-P	Field mustard	cytosol	70.92	86.42
Bra039176.1-P	Field mustard	cytosol	76.9	77.75
Bra021458.1-P	Field mustard	nucleus	80.71	69.23
Bra001046.1-P	Field mustard	nucleus	81.52	67.57
Solyc02g089610.1.1	Tomato	cytosol	62.23	63.26
KRH01466	Soybean	cytosol, golgi, nucleus	61.68	63.23
PGSC0003DMT400026053	Potato	cytosol	61.96	62.98
KRH45175	Soybean	cytosol	61.41	62.95
VIT_14s0083g00580.t01	Wine grape	cytosol	61.68	56.05
TraesCS6A01G219500.1	Wheat	cytosol	50.82	48.2
HORVU6Hr1G056110.1	Barley	cytosol	50.82	48.07
TraesCS6D01G202500.1	Wheat	cytosol	50.54	47.94
TraesCS6B01G249000.1	Wheat	cytosol	50.54	47.94
Os02t0611200-01	Rice	cytosol	50.82	47.34
TraesCS2B01G372900.1	Wheat	cytosol	50.27	47.31
EES05409	Sorghum	plastid	51.09	47.24
TraesCS5B01G220000.1	Wheat	cytosol, nucleus, peroxisome	50.27	47.19
TraesCS5A01G221200.1	Wheat	cytosol	50.27	46.95
TraesCS5D01G228900.1	Wheat	cytosol, nucleus, peroxisome	50.0	46.94
Zm00001d051056_P001	Maize	plastid	50.27	46.84
EER98924	Sorghum	cytosol	50.27	46.84
Zm00001d025773_P002	Maize	cytosol, plastid	49.73	46.56
Os04t0498600-01	Rice	cytosol	50.27	46.48
Zm00001d020543_P001	Maize	cytosol	49.46	46.43
Os09t0424300-03	Rice	cytosol	49.18	46.17
Zm00001d003157_P001	Maize	cytosol	49.46	45.5
GSMUA_Achr9P18460_001	Banana	cytosol	52.45	45.41
TraesCS2A01G355400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.0	44.34
TraesCS2D01G352900.1	Wheat	cytosol	48.91	44.01
HORVU5Hr1G064040.8	Barley	cytosol	50.0	41.63
HORVU2Hr1G086140.5	Barley	cytosol	50.27	41.11
Bra002194.1-P	Field mustard	cytosol	38.04	40.46
OQU81878	Sorghum	cytosol	50.0	40.44
Bra023699.1-P	Field mustard	cytosol	38.04	39.66
Bra006485.1-P	Field mustard	cytosol	37.23	39.6
Bra021271.1-P	Field mustard	cytosol	34.78	39.14

Protein Annotations

KEGG:00270+4.1.1.50	KEGG:00330+4.1.1.50	Gene3D:3.30.360.50	Gene3D:3.60.90.10	MapMan:8.2.1	EnsemblPlantsGene:Bra008662
EnsemblPlants:Bra008662.1	EnsemblPlants:Bra008662.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004014	GO:GO:0006139
GO:GO:0006557	GO:GO:0006596	GO:GO:0006597	GO:GO:0008150	GO:GO:0008152	GO:GO:0008295
GO:GO:0009058	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831	UniProt:M4CWR5	PFAM:PF01536
PIRSF:PIRSF001355	ScanProsite:PS01336	PANTHER:PTHR11570	PANTHER:PTHR11570:SF14	InterPro:S-AdoMet_deCO2ase_CS	InterPro:S-AdoMet_deCO2ase_core
InterPro:S-AdoMet_decarboxylase	SUPFAM:SSF56276	TIGRFAMs:TIGR00535	UniParc:UPI0002544C35	:	:

Description

AT5G15950 (E=1e-192) | adenosylmethionine decarboxylase family protein

Coordinates

chrA10:-:13288073..13289179

Molecular Weight (calculated)

40491.5 Da

IEP (calculated)

4.473

GRAVY (calculated)

-0.232

Length

368 amino acids

Sequence
(BLAST)

001: MSLSAIGFEG YEKRLEVSFF EPSLFLDTHG KGLRALSKSQ IDEILAPAEC TIVSSLSNDE LDSYVLSESS LFIFPYKIII KTCGTTKLLL SIEPLLRLAG
101: GVSLEVKSVR YTRGSFLCPG GQPFPHRNFS EEVSVLDGHF AKMGLSSVAY LMGDDDETKK WHVYSASAPA KNSNGDNNVY TLEMCMTGLD KDKASVFFKN
201: ESSSAGSMTD NSGIRKILPQ SQICDFEFEP CGYSMNSVEG DAISTIHVTP EDGFSYASFE AVGYDFTTMD LSQLVSRVLT CFEPKQFSVA VHSSVAQKSY
301: DHSGLSVDLE DYGCRETTVE SLGEERGTVI YQRFEKLGMY CGSPRSTLKC EWSSNSSCTS EDEKEEGI

Best Arabidopsis Sequence Match ( AT5G15950.1 )
(BLAST)

001: MAMSAIGFEG YEKRLEVTFF EPGLFLDTQG KGLRALAKSQ IDEILQPAEC TIVSSLSNDQ LDSYVLSESS LFIFPYKIVI KTCGTTKLLL SIEPLLRLAG
101: ELSLDVKAVR YTRGSFLCPG GQPFPHRNFS EEVSVLDGHF AKLGLSSVAY LMGNDDETKK WHVYSASSAN SNNKNNVYTL EMCMTGLDKD KASVFYKNES
201: SSAGSMTDNS GIRKILPQSQ ICDFEFEPCG YSMNSIEGDA ISTIHVTPED GFSYASFEAV GYDFTTMDLS HLVSKVLTCF KPKQFSVAVH STVAQKSYDS
301: GLSVDLDDYG CKESTMESLG EERGTVMYQR FEKLGRYCGS PRSTLKCEWS SNSSCNSEDE KE

Arabidopsis Description

SAMDC2S-adenosylmethionine decarboxylase proenzyme 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7T9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.