Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49835 | Canola | cytosol | 49.61 | 19.27 |
| Bra021271.1-P | Field mustard | cytosol | 48.82 | 18.96 |
| AT3G02470.1 | Thale cress | cytosol | 52.76 | 18.31 |
| AT5G15950.2 | Thale cress | cytosol | 46.46 | 16.3 |
| AT3G25570.2 | Thale cress | cytosol | 40.16 | 14.61 |
| Zm00001d020543_P001 | Maize | cytosol | 44.88 | 14.54 |
| TraesCS5A01G221200.1 | Wheat | cytosol | 43.31 | 13.96 |
| TraesCS5B01G220000.1 | Wheat | cytosol, nucleus, peroxisome | 42.52 | 13.78 |
| EER98924 | Sorghum | cytosol | 42.52 | 13.67 |
| Os04t0498600-01 | Rice | cytosol | 42.52 | 13.57 |
| TraesCS2B01G372900.1 | Wheat | cytosol | 41.73 | 13.55 |
| TraesCS5D01G228900.1 | Wheat | cytosol, nucleus, peroxisome | 41.73 | 13.52 |
| Os09t0424300-03 | Rice | cytosol | 40.94 | 13.27 |
| GSMUA_Achr9P18460_001 | Banana | cytosol | 44.09 | 13.18 |
| EES05409 | Sorghum | plastid | 40.94 | 13.07 |
| AT5G18930.1 | Thale cress | cytosol | 35.43 | 12.97 |
| TraesCS2D01G352900.1 | Wheat | cytosol | 41.73 | 12.96 |
| Zm00001d051056_P001 | Maize | plastid | 40.16 | 12.91 |
| Os02t0611200-01 | Rice | cytosol | 40.16 | 12.91 |
| TraesCS6B01G249000.1 | Wheat | cytosol | 39.37 | 12.89 |
| Zm00001d025773_P002 | Maize | cytosol, plastid | 39.37 | 12.72 |
| TraesCS6A01G219500.1 | Wheat | cytosol | 38.58 | 12.63 |
| TraesCS6D01G202500.1 | Wheat | cytosol | 38.58 | 12.63 |
| TraesCS2A01G355400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 40.94 | 12.53 |
| Zm00001d003157_P001 | Maize | cytosol | 39.37 | 12.5 |
| HORVU6Hr1G056110.1 | Barley | cytosol | 37.8 | 12.34 |
| HORVU5Hr1G064040.8 | Barley | cytosol | 42.52 | 12.22 |
| HORVU2Hr1G086140.5 | Barley | cytosol | 41.73 | 11.78 |
| OQU81878 | Sorghum | cytosol | 39.37 | 10.99 |
Protein Annotations
| KEGG:00270+4.1.1.50 | KEGG:00330+4.1.1.50 | EntrezGene:28719279 | Gene3D:3.60.90.10 | MapMan:8.2.1 | UniProt:A0A1I9LT04 |
| ProteinID:ANM65712.1 | ArrayExpress:AT3G17717 | EnsemblPlantsGene:AT3G17717 | EnsemblPlants:AT3G17717.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004014 | GO:GO:0006597 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008295 | GO:GO:0009058 |
| GO:GO:0009987 | RefSeq:NP_001327660.1 | PFAM:PF01536 | PANTHER:PTHR11570 | PANTHER:PTHR11570:SF14 | InterPro:S-AdoMet_deCO2ase_core |
| InterPro:S-AdoMet_decarboxylase | SUPFAM:SSF56276 | UniParc:UPI00084948A5 | : | : | : |
Description
S-adenosylmethionine decarboxylase proenzyme [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT04]
Coordinates
chr3:+:6061180..6061762
Molecular Weight (calculated)
14203.8 Da
IEP (calculated)
4.925
GRAVY (calculated)
-0.310
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVPLSSSST TGKKLPTIEM CMRELDREKA AQYYKDRDDG RTMIDKSGVG QIFPEATVHA HEFEPFGFSM NTVEGFAIST IHVSPQPESS YASFEAVGYD
101: ISTDEKLNLV IERVLSCFRP KQFTVAI
101: ISTDEKLNLV IERVLSCFRP KQFTVAI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.