Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13929 | Canola | cytosol | 98.55 | 98.55 |
| Bra002194.1-P | Field mustard | cytosol | 92.77 | 92.77 |
| CDX88906 | Canola | cytosol | 88.44 | 88.18 |
| AT5G18930.1 | Thale cress | cytosol | 86.13 | 85.88 |
| CDX70856 | Canola | cytosol | 85.84 | 85.59 |
| CDY47189 | Canola | cytosol | 80.64 | 80.17 |
| Solyc01g080380.2.1 | Tomato | cytosol | 57.8 | 60.61 |
| PGSC0003DMT400081774 | Potato | cytosol | 57.8 | 60.61 |
| VIT_05s0020g02370.t01 | Wine grape | cytosol | 60.98 | 60.29 |
| KRH50975 | Soybean | cytosol | 59.83 | 59.83 |
| KRH02157 | Soybean | cytosol | 60.12 | 58.92 |
| GSMUA_Achr3P22890_001 | Banana | cytosol | 55.2 | 57.01 |
| PGSC0003DMT400079043 | Potato | cytosol | 55.2 | 56.85 |
| KRH20949 | Soybean | cytosol | 57.23 | 56.57 |
| KRH11332 | Soybean | cytosol | 56.94 | 56.29 |
| Solyc06g054460.1.1 | Tomato | cytosol | 54.05 | 55.33 |
| GSMUA_Achr11P... | Banana | cytosol | 53.47 | 54.09 |
| Os05t0141800-00 | Rice | cytosol | 46.24 | 44.57 |
| CDY71278 | Canola | cytosol | 40.46 | 38.57 |
| CDY57536 | Canola | cytosol | 40.46 | 38.46 |
| CDX91992 | Canola | cytosol | 40.75 | 38.42 |
| CDX69487 | Canola | cytosol | 40.17 | 37.77 |
| CDX74257 | Canola | cytosol | 39.88 | 37.5 |
| CDX70666 | Canola | cytosol | 38.73 | 36.91 |
| CDY26478 | Canola | cytosol | 39.02 | 36.78 |
| CDX78666 | Canola | cytosol | 31.5 | 36.09 |
| CDY49835 | Canola | cytosol | 31.21 | 33.03 |
| CDY71710 | Canola | cytosol, nucleus, plastid | 40.46 | 32.63 |
| CDY43235 | Canola | cytosol, plastid | 40.17 | 30.02 |
| CDX85819 | Canola | cytosol | 6.36 | 17.19 |
| CDY54323 | Canola | cytosol, nucleus, plastid | 5.49 | 17.12 |
| CDY63462 | Canola | plastid | 6.94 | 15.58 |
| CDY33352 | Canola | plastid | 6.65 | 14.94 |
| CDY06772 | Canola | nucleus | 6.94 | 14.72 |
| CDX99815 | Canola | cytosol | 6.65 | 12.5 |
| CDY17081 | Canola | cytosol | 6.65 | 12.3 |
| CDX84130 | Canola | cytosol | 4.05 | 11.2 |
Protein Annotations
| KEGG:00270+4.1.1.50 | KEGG:00330+4.1.1.50 | Gene3D:3.30.360.50 | Gene3D:3.60.90.10 | MapMan:8.2.1 | GO:A0A078DUL4 |
| EnsemblPlants:CDX92572 | ProteinID:CDX92572 | ProteinID:CDX92572.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004014 |
| GO:GO:0006139 | GO:GO:0006557 | GO:GO:0006597 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008295 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00154366001 | PFAM:PF01536 | PIRSF:PIRSF001355 | ScanProsite:PS01336 |
| PANTHER:PTHR11570 | PANTHER:PTHR11570:SF1 | MetaCyc:PWY-6834 | InterPro:S-AdoMet_deCO2ase_CS | InterPro:S-AdoMet_deCO2ase_core | InterPro:S-AdoMet_decarboxylase |
| SUPFAM:SSF56276 | TIGRFAMs:TIGR00535 | UniPathway:UPA00331 | UniParc:UPI0004EEF506 | : | : |
Description
BnaA10g16110D
Coordinates
chrLK031872:+:1348010..1349050
Molecular Weight (calculated)
38726.8 Da
IEP (calculated)
5.283
GRAVY (calculated)
-0.219
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSGFEGFE KRLELRFFND SITNNNPMGL RLIDFESLDQ VLNEVQCTVV SAVANHSFDA YVLSESSLFV YPTKIIIKTC GTTQLLKSIR PLIHLARNVN
101: LTLRACRYSR GSFIFPNSQP FPYTSFEDEV VIVEESLPKS LRYRKASVMT PSNSNPSRAW HVFTASADVE PDESLVVVEV CMTELDRVNA RSFFRRKGDE
201: GNSDSAGKEM TRLSGIDMIN ANAFICDFAF DPCGYSMNGV DGDRYSTIHV TPEDGFSYAS FECGLSLYDG GHGDIAEVLA RAIDVFRPGC VSIATTYNGE
301: DYDHEVTKRV ERVLAKKLDL KCRSRLMDEF PGSGTVVYQS FTPRRK
101: LTLRACRYSR GSFIFPNSQP FPYTSFEDEV VIVEESLPKS LRYRKASVMT PSNSNPSRAW HVFTASADVE PDESLVVVEV CMTELDRVNA RSFFRRKGDE
201: GNSDSAGKEM TRLSGIDMIN ANAFICDFAF DPCGYSMNGV DGDRYSTIHV TPEDGFSYAS FECGLSLYDG GHGDIAEVLA RAIDVFRPGC VSIATTYNGE
301: DYDHEVTKRV ERVLAKKLDL KCRSRLMDEF PGSGTVVYQS FTPRRK
001: MAVSGFEGFE KRLELRFFDD DKPITKNPMG LRLIDFESLD QVLNEVQCTV VSAVANRSFD AYVLSESSLF VYPTKIIIKT CGTTQLLKSI RPLIHLARNL
101: GLTLRACRYS RGSFIFPKAQ PFPYTSFKDE VIVVEESLPK SLCYRKASVM TPSNNPSRAW HVFTASADVE SDEHVVVVEV CMTELDRVNA RSFFKRKGDE
201: KNNSDSAGKE MTRLSGIDNI NANAYICDFA FDPCGYSMNG VDGDRYSTIH VTPEDGFSYA SFECGLSLYD NGHEDISEVL SRAIDVFRPS DVSIATTYGG
301: EDYNHEVTKR VERVLAKKLD LKCRSRLMDE FPGSGTVVYQ SFTPRRK
101: GLTLRACRYS RGSFIFPKAQ PFPYTSFKDE VIVVEESLPK SLCYRKASVM TPSNNPSRAW HVFTASADVE SDEHVVVVEV CMTELDRVNA RSFFKRKGDE
201: KNNSDSAGKE MTRLSGIDNI NANAYICDFA FDPCGYSMNG VDGDRYSTIH VTPEDGFSYA SFECGLSLYD NGHEDISEVL SRAIDVFRPS DVSIATTYGG
301: EDYNHEVTKR VERVLAKKLD LKCRSRLMDE FPGSGTVVYQ SFTPRRK
Arabidopsis Description
SAMDC4S-adenosylmethionine decarboxylase proenzyme 4 [Source:UniProtKB/Swiss-Prot;Acc:Q3E9D5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.