Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g005220.2.1 | Tomato | plastid | 91.33 | 37.8 |
| PGSC0003DMT400054304 | Potato | plastid | 91.33 | 37.18 |
| PGSC0003DMT400038350 | Potato | cytosol | 82.08 | 34.55 |
| KRH74371 | Soybean | nucleus, plastid | 69.94 | 32.7 |
| Bra005337.1-P | Field mustard | plastid | 67.63 | 32.5 |
| CDY31692 | Canola | plastid | 67.63 | 32.5 |
| CDX84202 | Canola | plastid | 65.9 | 31.49 |
| VIT_02s0012g02050.t01 | Wine grape | plastid | 68.21 | 30.89 |
| AT2G35490.1 | Thale cress | plastid | 66.47 | 30.59 |
| Os10t0575700-00 | Rice | plastid | 65.32 | 30.21 |
| EER94440 | Sorghum | plastid | 64.16 | 29.13 |
| Zm00001d030074_P001 | Maize | plastid | 64.16 | 29.06 |
| TraesCS1B01G208500.1 | Wheat | plastid | 59.54 | 28.61 |
| TraesCS1A01G193500.1 | Wheat | plastid | 58.96 | 28.33 |
| GSMUA_Achr6P01070_001 | Banana | plastid | 62.43 | 28.12 |
| TraesCS1D01G197400.1 | Wheat | plastid | 57.8 | 27.78 |
| HORVU1Hr1G050640.1 | Barley | cytosol | 60.12 | 26.46 |
| PGSC0003DMT400043112 | Potato | extracellular | 47.98 | 25.46 |
| GSMUA_Achr2P09810_001 | Banana | plastid | 16.18 | 10.53 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400008946 | EnsemblPlantsGene:PGSC0003DMG400003485 | EntrezGene:102584403 | InterPro:PAP/fibrillin_dom | PANTHER:PTHR31906 | PANTHER:PTHR31906:SF5 |
| PFAM:PF04755 | PGSC:PGSC0003DMG400003485 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000294F540 | UniProt:M0ZVB7 |
| MapMan:35.1 | : | : | : | : | : |
Description
Plastid fibrillin 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400003485]
Coordinates
chr00:-:29769463..29776604
Molecular Weight (calculated)
18769.7 Da
IEP (calculated)
7.541
GRAVY (calculated)
0.038
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNPHRFTAF SELLPLLAVG TIPLLKVEKI SQTISMSSLT IENSTTLSSP VATSSFSATA VFEVQSPSRI QVEFKEGTFK PPEIKSKIDL PKNVDIFGQN
101: ISLSPLQQSL GPLENVVAGI ARNISSMPPL KVPIPGERTK SWLITTYLDS DLRISRGDGG LFVLVKEQSS LLD
101: ISLSPLQQSL GPLENVVAGI ARNISSMPPL KVPIPGERTK SWLITTYLDS DLRISRGDGG LFVLVKEQSS LLD
001: MATLFTVARP SSLLYVSSIN PSKTFSPSIS LKLNSLSFSF GYRPKPLRFS KIRSSLPSES ESESDLDASA VTDEWGEKPG DANEPDSQPD NVTVNVITDE
101: WGEKSGPELE ESGTRFMESD PPRNEDEWGG EIGGETEADA GNGSAVSDPT WELKRCLADS VYGTELGFKA GSEVRAEVLE LVNQLEALNP TPAPLENPEL
201: LDGNWVLLYT AFSELIPLLA AGSTPLLKVK SISQSIDTNN LIIDNSTTLS SPFADFSFSA TASFEVRSPS RIEVSFKEGT LKPPVIKSSV DLPESVGVFG
301: QQISLSLLKQ SLNPLQDVAA NISRALSGQP PLKLPFPGNR GSSWLLTTYL DKDLRISRGD GGLFVLAREG SSLLEL
101: WGEKSGPELE ESGTRFMESD PPRNEDEWGG EIGGETEADA GNGSAVSDPT WELKRCLADS VYGTELGFKA GSEVRAEVLE LVNQLEALNP TPAPLENPEL
201: LDGNWVLLYT AFSELIPLLA AGSTPLLKVK SISQSIDTNN LIIDNSTTLS SPFADFSFSA TASFEVRSPS RIEVSFKEGT LKPPVIKSSV DLPESVGVFG
301: QQISLSLLKQ SLNPLQDVAA NISRALSGQP PLKLPFPGNR GSSWLLTTYL DKDLRISRGD GGLFVLAREG SSLLEL
Arabidopsis Description
PAP3Probable plastid-lipid-associated protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82291]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.