CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005337.1-P	Field mustard	plastid	98.61	98.61
CDX84202	Canola	plastid	92.78	92.27
AT2G35490.1	Thale cress	plastid	74.72	71.54
PGSC0003DMT400008946	Potato	plastid	32.5	67.63
Solyc08g076480.2.1	Tomato	plastid	51.67	54.07
VIT_02s0012g02050.t01	Wine grape	plastid	56.67	53.4
EER94440	Sorghum	plastid	54.44	51.44
KRH74371	Soybean	nucleus, plastid	52.78	51.35
Zm00001d030074_P001	Maize	plastid	54.17	51.05
Os10t0575700-00	Rice	plastid	52.22	50.27
GSMUA_Achr6P01070_001	Banana	plastid	52.78	49.48
TraesCS1A01G193500.1	Wheat	plastid	48.89	48.89
TraesCS1D01G197400.1	Wheat	plastid	48.61	48.61
TraesCS1B01G208500.1	Wheat	plastid	48.61	48.61
CDY71809	Canola	plastid	23.89	45.74
PGSC0003DMT400038350	Potato	cytosol	52.22	45.74
HORVU1Hr1G050640.1	Barley	cytosol	48.61	44.53
Solyc08g005220.2.1	Tomato	plastid	50.28	43.3
PGSC0003DMT400054304	Potato	plastid	50.28	42.59
CDY16684	Canola	plastid	36.39	41.2
CDY21291	Canola	plastid	36.11	41.14
CDX90850	Canola	plastid	36.11	41.14
CDX82925	Canola	plastid	34.72	39.43
CDX79139	Canola	plastid	33.89	38.24
GSMUA_Achr2P09810_001	Banana	plastid	24.72	33.46
CDX94540	Canola	plastid	13.06	31.54

Protein Annotations

EnsemblPlants:CDY31692	EnsemblPlantsGene:GSBRNA2T00050307001	InterPro:PAP/fibrillin_dom	PANTHER:PTHR31906	PANTHER:PTHR31906:SF5	PFAM:PF04755
ProteinID:CDY31692	ProteinID:CDY31692.1	SEG:seg	UniParc:UPI0004EF3F14	UniProt:A0A078H2F2	MapMan:35.1

Description

BnaA05g08550DBnaA05g08550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2F2]

Coordinates

chrLK032277:-:302533..304262

Molecular Weight (calculated)

39262.6 Da

IEP (calculated)

4.265

GRAVY (calculated)

-0.413

Length

360 amino acids

Sequence
(BLAST)

001: MATLFTTTTT SRPFPANPSK TFSPSISLKP NALSFSLTHH RPPRPLRFSK IRSSLPSESD SEPEGGYSIT DEWGEQPAEP ESPPDNAPSA VSDEWGEKSE
101: SVPEETVTRF AESDPPTNDD EWEEREADDG VDKTWELKRC LADTVYGTEL GFRAGSEVRA EVLEIVNQLE ALNPTQAPVE NPELLDGNWV LLYTAFSELL
201: PLLAAGSTPL LKVKSISQSI DTKSLSIDNS TTLSSPFADF SFSATASFEV RTPSRIEVSF KEGTLKPPEI KSSVDLPESV GVFGQEINLS FLKQSLNPLQ
301: DVAANISRAI SGQPPLKLPF PGNRGSSWLL TTYLDKDLRI SRGDGGLFVL AREGSSLLEL

Best Arabidopsis Sequence Match ( AT2G35490.1 )
(BLAST)

001: MATLFTVARP SSLLYVSSIN PSKTFSPSIS LKLNSLSFSF GYRPKPLRFS KIRSSLPSES ESESDLDASA VTDEWGEKPG DANEPDSQPD NVTVNVITDE
101: WGEKSGPELE ESGTRFMESD PPRNEDEWGG EIGGETEADA GNGSAVSDPT WELKRCLADS VYGTELGFKA GSEVRAEVLE LVNQLEALNP TPAPLENPEL
201: LDGNWVLLYT AFSELIPLLA AGSTPLLKVK SISQSIDTNN LIIDNSTTLS SPFADFSFSA TASFEVRSPS RIEVSFKEGT LKPPVIKSSV DLPESVGVFG
301: QQISLSLLKQ SLNPLQDVAA NISRALSGQP PLKLPFPGNR GSSWLLTTYL DKDLRISRGD GGLFVLAREG SSLLEL

Arabidopsis Description

PAP3Probable plastid-lipid-associated protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82291]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.