Factsheet for Bra005337.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31692	Canola	plastid	98.61	98.61
AT2G35490.1	Thale cress	plastid	74.72	71.54
PGSC0003DMT400008946	Potato	plastid	32.5	67.63
VIT_02s0012g02050.t01	Wine grape	plastid	57.22	53.93
Solyc08g076480.2.1	Tomato	plastid	51.39	53.78
KRH74371	Soybean	nucleus, plastid	53.06	51.62
EER94440	Sorghum	plastid	54.44	51.44
Zm00001d030074_P001	Maize	plastid	54.17	51.05
Os10t0575700-00	Rice	plastid	51.94	50.0
GSMUA_Achr6P01070_001	Banana	plastid	53.06	49.74
TraesCS1A01G193500.1	Wheat	plastid	48.61	48.61
TraesCS1B01G208500.1	Wheat	plastid	48.33	48.33
TraesCS1D01G197400.1	Wheat	plastid	48.33	48.33
PGSC0003DMT400038350	Potato	cytosol	52.5	45.99
HORVU1Hr1G050640.1	Barley	cytosol	48.33	44.27
Solyc08g005220.2.1	Tomato	plastid	50.56	43.54
PGSC0003DMT400054304	Potato	plastid	50.56	42.82
Bra029481.1-P	Field mustard	plastid	35.83	40.57
Bra000785.1-P	Field mustard	plastid	36.67	40.37
Bra013602.1-P	Field mustard	plastid	32.78	36.99
GSMUA_Achr2P09810_001	Banana	plastid	24.72	33.46

Protein Annotations

EnsemblPlants:Bra005337.1	EnsemblPlants:Bra005337.1-P	EnsemblPlantsGene:Bra005337	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0010287	GO:GO:0016020	InterPro:PAP/fibrillin_dom	PANTHER:PTHR31906	PANTHER:PTHR31906:SF5	PFAM:PF04755
SEG:seg	UniParc:UPI0002547E44	UniProt:M4CM99	MapMan:35.1	:	:

Description

AT2G35490 (E=2e-140) | plastid-lipid associated protein PAP, putative

Coordinates

chrA05:+:4917466..4919026

Molecular Weight (calculated)

39262.6 Da

IEP (calculated)

4.269

GRAVY (calculated)

-0.413

Length

360 amino acids

Sequence
(BLAST)

001: MATLFTTTTT SRPFPANPSK TFSPSISLKP NALSFSLTHH RPPRPLRFSK IRSSLPSESD SEPEGGYSIT DEWGEQPAEP ESPPDNAPSA VSDEWGEKSE
101: SVPEESVTRF AESDPPTNED EWEEREADDG VDKTWELKRC LADTVYGTEL GFRAGSEVRA EVLEIVNQLE ALNPTQAPVE NPELLDGNWV LLYTAFSELL
201: PLLAAGSTPL LKVKSISQSI DTKSLSIDNS TTLSSPFADF SFSATASFEV RTPSRIEVSF KEGTLKPPEI KSSVDLPESV GVFGQEINLS FLKQSLNPLQ
301: DVAANISRAI SGQPPLKLPF PGNRGSSWLL TTYLDKDLRI SRGDGGLFVL AREGSSLLEL

Best Arabidopsis Sequence Match ( AT2G35490.1 )
(BLAST)

001: MATLFTVARP SSLLYVSSIN PSKTFSPSIS LKLNSLSFSF GYRPKPLRFS KIRSSLPSES ESESDLDASA VTDEWGEKPG DANEPDSQPD NVTVNVITDE
101: WGEKSGPELE ESGTRFMESD PPRNEDEWGG EIGGETEADA GNGSAVSDPT WELKRCLADS VYGTELGFKA GSEVRAEVLE LVNQLEALNP TPAPLENPEL
201: LDGNWVLLYT AFSELIPLLA AGSTPLLKVK SISQSIDTNN LIIDNSTTLS SPFADFSFSA TASFEVRSPS RIEVSFKEGT LKPPVIKSSV DLPESVGVFG
301: QQISLSLLKQ SLNPLQDVAA NISRALSGQP PLKLPFPGNR GSSWLLTTYL DKDLRISRGD GGLFVLAREG SSLLEL

Arabidopsis Description

PAP3Probable plastid-lipid-associated protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82291]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.