Factsheet for GSMUA_Achr6P01070_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008946	Potato	plastid	28.12	62.43
Os10t0575700-00	Rice	plastid	52.34	53.74
Zm00001d030074_P001	Maize	plastid	53.39	53.66
Bra005337.1-P	Field mustard	plastid	49.74	53.06
VIT_02s0012g02050.t01	Wine grape	plastid	52.6	52.88
CDY31692	Canola	plastid	49.48	52.78
EER94440	Sorghum	plastid	52.34	52.76
CDX84202	Canola	plastid	48.7	51.66
Solyc08g076480.2.1	Tomato	plastid	45.83	51.16
AT2G35490.1	Thale cress	plastid	50.0	51.06
TraesCS1A01G193500.1	Wheat	plastid	47.14	50.28
TraesCS1B01G208500.1	Wheat	plastid	46.88	50.0
TraesCS1D01G197400.1	Wheat	plastid	46.88	50.0
KRH74371	Soybean	nucleus, plastid	45.83	47.57
HORVU1Hr1G050640.1	Barley	cytosol	48.44	47.33
GSMUA_Achr7P05510_001	Banana	cytosol	29.95	46.18
PGSC0003DMT400038350	Potato	cytosol	46.88	43.8
GSMUA_Achr2P09810_001	Banana	plastid	29.95	43.23
Solyc08g005220.2.1	Tomato	plastid	46.35	42.58
PGSC0003DMT400054304	Potato	plastid	46.61	42.12
GSMUA_Achr3P12980_001	Banana	plastid	33.33	40.0
GSMUA_Achr4P20110_001	Banana	plastid	29.95	36.86

Protein Annotations

EnsemblPlants:GSMUA_Achr6P01070_001	EnsemblPlants:GSMUA_Achr6T01070_001	EnsemblPlantsGene:GSMUA_Achr6G01070_001	InterPro:PAP/fibrillin_dom	PANTHER:PTHR31906	PANTHER:PTHR31906:SF5
PFAM:PF04755	SEG:seg	UniParc:UPI000294A3C9	UniProt:M0T355	MapMan:35.1	:

Description

Probable plastid-lipid-associated protein 3, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G01070_001]

Coordinates

chr6:-:705304..709006

Molecular Weight (calculated)

40997.9 Da

IEP (calculated)

4.183

GRAVY (calculated)

-0.317

Length

384 amino acids

Sequence
(BLAST)

001: MAALLPSSLP SFSSAAPQKS NRPHRLLSKT LALPSLSSSS AAIKIHRSSS FAAASAVPGE DREPKIADEW GEKFEPEAEP PSAPDPPRDE DEWGTEPGAS
101: ASFAAGITDE WGEKAEPEVD APSPADPPVD EDEWGREPGG AGNLSGNGTP TPSEDNLGDL KRCLVDSLYG TELGFRASVE DRADILELVN QLEAANPTPA
201: PTEAPELLDG NWILLYTASS ELLPLLAVGT TPLLKIKRIS QAIDCKTMEI VNATTLSSPF ANFAFSVSAS FGVRSSSRIQ VQFKEGTFQP PEISSTLDLP
301: EKFDIFGQSI NLKPVQQTLN PVQEAVANVT RSISGQPPLK VPLPGNRAES WLLITYLDED FRISRGDGGL FVLAKEGSPL LDQL

Best Arabidopsis Sequence Match ( AT2G35490.1 )
(BLAST)

001: MATLFTVARP SSLLYVSSIN PSKTFSPSIS LKLNSLSFSF GYRPKPLRFS KIRSSLPSES ESESDLDASA VTDEWGEKPG DANEPDSQPD NVTVNVITDE
101: WGEKSGPELE ESGTRFMESD PPRNEDEWGG EIGGETEADA GNGSAVSDPT WELKRCLADS VYGTELGFKA GSEVRAEVLE LVNQLEALNP TPAPLENPEL
201: LDGNWVLLYT AFSELIPLLA AGSTPLLKVK SISQSIDTNN LIIDNSTTLS SPFADFSFSA TASFEVRSPS RIEVSFKEGT LKPPVIKSSV DLPESVGVFG
301: QQISLSLLKQ SLNPLQDVAA NISRALSGQP PLKLPFPGNR GSSWLLTTYL DKDLRISRGD GGLFVLAREG SSLLEL

Arabidopsis Description

PAP3Probable plastid-lipid-associated protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82291]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.