Factsheet for GSMUA_Achr2P09810_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01070_001	Banana	plastid	43.23	29.95
GSMUA_Achr7P05510_001	Banana	cytosol	23.31	24.9
Bra005337.1-P	Field mustard	plastid	33.46	24.72
CDY31692	Canola	plastid	33.46	24.72
Solyc08g076480.2.1	Tomato	plastid	31.95	24.71
CDX84202	Canola	plastid	33.46	24.59
AT2G35490.1	Thale cress	plastid	33.83	23.94
GSMUA_Achr3P12980_001	Banana	plastid	27.82	23.12
VIT_02s0012g02050.t01	Wine grape	plastid	32.71	22.77
KRH74371	Soybean	nucleus, plastid	30.83	22.16
TraesCS1D01G197400.1	Wheat	plastid	29.7	21.94
TraesCS1B01G208500.1	Wheat	plastid	29.7	21.94
TraesCS1A01G193500.1	Wheat	plastid	29.7	21.94
GSMUA_Achr4P20110_001	Banana	plastid	25.56	21.79
Zm00001d030074_P001	Maize	plastid	30.83	21.47
Os10t0575700-00	Rice	plastid	30.08	21.39
EER94440	Sorghum	plastid	29.32	20.47
Solyc08g005220.2.1	Tomato	plastid	31.58	20.1
PGSC0003DMT400038350	Potato	cytosol	30.08	19.46
PGSC0003DMT400054304	Potato	plastid	30.45	19.06
HORVU1Hr1G050640.1	Barley	cytosol	27.82	18.83
PGSC0003DMT400008946	Potato	plastid	10.53	16.18

Protein Annotations

EnsemblPlants:GSMUA_Achr2P09810_001	EnsemblPlants:GSMUA_Achr2T09810_001	EnsemblPlantsGene:GSMUA_Achr2G09810_001	InterPro:PAP/fibrillin_dom	PANTHER:PTHR31906	PANTHER:PTHR31906:SF5
PFAM:PF04755	SEG:seg	UniParc:UPI0002968BC1	UniProt:M0S6M2	MapMan:35.1	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G09810_001]

Coordinates

chr2:+:13209280..13212265

Molecular Weight (calculated)

29200.2 Da

IEP (calculated)

5.075

GRAVY (calculated)

-0.585

Length

266 amino acids

Sequence
(BLAST)

001: MVTLLPSLSS ASASPNPNRP DRLLSLRPNT LALPSLSAAA SRIRISSSSA TSVPGRDPRV SDEWGEKPEP EADRPGEKAE PEVEASAQAD APKDEDEWGR
101: EPGGAEYLSG NGTPVPSDDK LEDLKRCQVD SLYGTELGLR ASVEDRAEIL ELINQLEASN PTPAPTEAPE LLDGNWILLY TSFSMILPLL AVGFKVHPEY
201: RSSSRKAFFS LQRYPPPWIC QKKLTSSGRR LLETCTADME PRTRGCCKHR SFHLWPATSQ STTAWK

Best Arabidopsis Sequence Match ( AT2G35490.1 )
(BLAST)

001: MATLFTVARP SSLLYVSSIN PSKTFSPSIS LKLNSLSFSF GYRPKPLRFS KIRSSLPSES ESESDLDASA VTDEWGEKPG DANEPDSQPD NVTVNVITDE
101: WGEKSGPELE ESGTRFMESD PPRNEDEWGG EIGGETEADA GNGSAVSDPT WELKRCLADS VYGTELGFKA GSEVRAEVLE LVNQLEALNP TPAPLENPEL
201: LDGNWVLLYT AFSELIPLLA AGSTPLLKVK SISQSIDTNN LIIDNSTTLS SPFADFSFSA TASFEVRSPS RIEVSFKEGT LKPPVIKSSV DLPESVGVFG
301: QQISLSLLKQ SLNPLQDVAA NISRALSGQP PLKLPFPGNR GSSWLLTTYL DKDLRISRGD GGLFVLAREG SSLLEL

Arabidopsis Description

PAP3Probable plastid-lipid-associated protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82291]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.