Factsheet for PGSC0003DMT400054304

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400008946	Potato	plastid	37.18	91.33
Solyc08g005220.2.1	Tomato	plastid	89.65	91.15
PGSC0003DMT400038350	Potato	cytosol	50.82	52.55
KRH74371	Soybean	nucleus, plastid	45.18	51.89
Bra005337.1-P	Field mustard	plastid	42.82	50.56
AT2G35490.1	Thale cress	plastid	44.71	50.53
CDY31692	Canola	plastid	42.59	50.28
CDX84202	Canola	plastid	42.82	50.28
Os10t0575700-00	Rice	plastid	42.82	48.66
VIT_02s0012g02050.t01	Wine grape	plastid	43.53	48.43
EER94440	Sorghum	plastid	41.88	46.72
GSMUA_Achr6P01070_001	Banana	plastid	42.12	46.61
Zm00001d030074_P001	Maize	plastid	41.88	46.6
TraesCS1A01G193500.1	Wheat	plastid	38.82	45.83
TraesCS1B01G208500.1	Wheat	plastid	38.59	45.56
TraesCS1D01G197400.1	Wheat	plastid	38.59	45.56
HORVU1Hr1G050640.1	Barley	cytosol	40.0	43.26
PGSC0003DMT400043112	Potato	extracellular	30.35	39.57
GSMUA_Achr2P09810_001	Banana	plastid	19.06	30.45

Protein Annotations

EnsemblPlants:PGSC0003DMT400054304	EnsemblPlantsGene:PGSC0003DMG400021072	EntrezGene:102586383	InterPro:PAP/fibrillin_dom	PANTHER:PTHR31906	PANTHER:PTHR31906:SF5
PFAM:PF04755	PGSC:PGSC0003DMG400021072	SEG:seg	UniParc:UPI000294E3CB	UniProt:M1BW31	MapMan:35.1

Description

Plastoglobulin-1, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400021072]

Coordinates

chr3:-:39421560..39424120

Molecular Weight (calculated)

46923.3 Da

IEP (calculated)

4.252

GRAVY (calculated)

-0.297

Length

425 amino acids

Sequence
(BLAST)

001: MSILSLHSLI FNVKTTAKSY CFTSFLPSSS ISSSKFRKLS QFSTHSSFDD SRDFFVPKPK QNDDDSDDKP FSFVDEWGER SKPQLRPMTK LSESDPPIDV
101: DEWGRAELGI NNSSGIEDEW GEKSFPELRP TKTVSDSDPP IDEDEWIGAK LTGNNNIDRV SNQGVLEPET MEEDGWDEAE VVGRINAGVE EDERIAEMKR
201: CLIDTVYGTD FGLRASSEVR AEALELVAKL EAANPTPNPV ELLDGNWILV FTAFSELLPL LAVGTIPLLK VEKISQTISM SSLTIENSTT LSSPVATSSF
301: SATAVFEVQS PSRIQVPFLD CTIEFKEGTF KPPEIKSKID LPENMDIFGQ NISLSPLQQS LGPLENAMVG IARTISGLPL LKVPIPGERT KSWLITTYLD
401: SDLRISRGDG GIFVLVKEKS SLLDQ

Best Arabidopsis Sequence Match ( AT2G35490.1 )
(BLAST)

001: MATLFTVARP SSLLYVSSIN PSKTFSPSIS LKLNSLSFSF GYRPKPLRFS KIRSSLPSES ESESDLDASA VTDEWGEKPG DANEPDSQPD NVTVNVITDE
101: WGEKSGPELE ESGTRFMESD PPRNEDEWGG EIGGETEADA GNGSAVSDPT WELKRCLADS VYGTELGFKA GSEVRAEVLE LVNQLEALNP TPAPLENPEL
201: LDGNWVLLYT AFSELIPLLA AGSTPLLKVK SISQSIDTNN LIIDNSTTLS SPFADFSFSA TASFEVRSPS RIEVSFKEGT LKPPVIKSSV DLPESVGVFG
301: QQISLSLLKQ SLNPLQDVAA NISRALSGQP PLKLPFPGNR GSSWLLTTYL DKDLRISRGD GGLFVLAREG SSLLEL

Arabidopsis Description

PAP3Probable plastid-lipid-associated protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82291]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.