Factsheet for Solyc02g061800.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g038110.1.1	Tomato	endoplasmic reticulum, extracellular	16.72	80.33
Solyc12g089200.1.1	Tomato	nucleus	20.14	78.67
Solyc12g038030.1.1	Tomato	cytosol	24.57	77.42
Solyc12g038000.1.1	Tomato	nucleus	51.88	71.03
Solyc12g049430.1.1	Tomato	cytoskeleton, cytosol, nucleus	86.69	66.49
PGSC0003DMT400011166	Potato	nucleus	61.77	61.99
Solyc12g038070.1.1	Tomato	endoplasmic reticulum, extracellular, nucleus	32.76	60.76
Solyc12g038010.1.1	Tomato	mitochondrion	34.81	51.78
Solyc12g038120.1.1	Tomato	nucleus	34.47	47.2
Solyc12g038150.1.1	Tomato	nucleus	26.28	46.67
Solyc08g006090.2.1	Tomato	cytosol, nucleus	23.89	43.75
Solyc09g010190.2.1	Tomato	nucleus	23.21	41.46
Solyc12g038020.1.1	Tomato	cytosol	23.89	41.18
Solyc07g066420.2.1	Tomato	nucleus	75.77	37.82
Solyc08g062700.2.1	Tomato	nucleus	26.62	15.85
Solyc10g083930.1.1	Tomato	nucleus	11.95	15.22
Solyc09g008410.2.1	Tomato	plastid	11.6	14.41
Solyc02g092380.2.1	Tomato	nucleus	23.89	11.74
Solyc11g067090.1.1	Tomato	cytosol, nucleus	21.84	10.29

Protein Annotations

MapMan:18.12.1	Gene3D:2.40.100.10	Gene3D:3.30.70.330	InterPro:CRIP	InterPro:Cyclophilin-like_dom_sf	InterPro:Cyclophilin-type_PPIase
InterPro:Cyclophilin-type_PPIase_dom	InterPro:Cyclophilin_PPIL4	GO:GO:0000413	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:1901407
InterPro:IPR000504	InterPro:IPR002130	InterPro:IPR012677	InterPro:IPR029000	UniProt:K4B670	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFAM:PF00160	PRINTS:PR00153	PFscan:PS50072	PFscan:PS50102	PANTHER:PTHR11071
PANTHER:PTHR11071:SF156	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF50891	SUPFAM:SSF54928
EnsemblPlantsGene:Solyc02g061800.2	EnsemblPlants:Solyc02g061800.2.1	UniParc:UPI0002767EB9	SEG:seg	:	:

Description

Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:K4B670]

Coordinates

chr2:+:33312194..33313654

Molecular Weight (calculated)

33833.6 Da

IEP (calculated)

4.533

GRAVY (calculated)

-0.573

Length

293 amino acids

Sequence
(BLAST)

001: MSVMIVTSLR DITVDLFTDE CPLTCKNFLK LCKIKYYHNC IFHTIRKNFT IQTGDPTGTG SAGDSIYKFL YGSQARFFSD EIHPNLKHSQ MGTVAMASRT
101: GTSEKNLNAS QFYITLRDDL DSLDGEHTVF GEITEGFDTL NRINEAYVDD KGKPYQNIRI KHTYILYDPS QLDDLIPDAS PERNLKDEID DDVRLEDDWM
201: PKDEELGVRE EKEEALYIIF SRFGTVTSAE IIRDHKTGNS HCYAFIEFED KESCEQAYFT MDNTKIDDRR IRVDFSQSVA KLWPQLIDDL ETK

Best Arabidopsis Sequence Match ( AT1G53720.1 )
(BLAST)

001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGN GCFKCGSTDH IAKDCVGGPS SKFIVKDQNR QHGGGEGYEM VFEGDVHETP KHNSHERERS
401: EKIQRRSPHG NGEGKRQHRD ERDDGRRQHD REDARELERK HRERKERESR EDEDRRRRRR REESRDKESR RERDEDDHRS HRDYKERRRE RDDRHGREAR
501: HERRDR

Arabidopsis Description

CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.