Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g038110.1.1 | Tomato | endoplasmic reticulum, extracellular | 45.16 | 68.85 |
| Solyc12g089200.1.1 | Tomato | nucleus | 33.33 | 41.33 |
| Solyc12g038070.1.1 | Tomato | endoplasmic reticulum, extracellular, nucleus | 47.31 | 27.85 |
| Solyc02g061800.2.1 | Tomato | cytosol | 77.42 | 24.57 |
| Solyc08g006090.2.1 | Tomato | cytosol, nucleus | 40.86 | 23.75 |
| Solyc12g038000.1.1 | Tomato | nucleus | 51.61 | 22.43 |
| Solyc09g010190.2.1 | Tomato | nucleus | 36.56 | 20.73 |
| Solyc12g049430.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 76.34 | 18.59 |
| Solyc12g038150.1.1 | Tomato | nucleus | 23.66 | 13.33 |
| Solyc07g066420.2.1 | Tomato | nucleus | 73.12 | 11.58 |
| Solyc12g038010.1.1 | Tomato | mitochondrion | 20.43 | 9.64 |
| Solyc10g083930.1.1 | Tomato | nucleus | 22.58 | 9.13 |
| PGSC0003DMT400011166 | Potato | nucleus | 26.88 | 8.56 |
| Solyc09g008410.2.1 | Tomato | plastid | 21.51 | 8.47 |
| Solyc08g062700.2.1 | Tomato | nucleus | 41.94 | 7.93 |
| Solyc11g067090.1.1 | Tomato | cytosol, nucleus | 37.63 | 5.63 |
| Solyc02g092380.2.1 | Tomato | nucleus | 35.48 | 5.54 |
| Solyc12g038120.1.1 | Tomato | nucleus | 3.23 | 1.4 |
| Solyc12g038020.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.40.100.10 | MapMan:50.5.2 | InterPro:CRIP | InterPro:Cyclophilin-like_dom_sf | InterPro:Cyclophilin-type_PPIase | InterPro:Cyclophilin-type_PPIase_dom |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006139 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| GO:GO:1901407 | InterPro:IPR002130 | InterPro:IPR029000 | UniProt:K4DEF8 | PFAM:PF00160 | PFscan:PS50072 |
| PANTHER:PTHR11071 | PANTHER:PTHR11071:SF156 | SUPFAM:SSF50891 | EnsemblPlantsGene:Solyc12g038030.1 | EnsemblPlants:Solyc12g038030.1.1 | UniParc:UPI000276A335 |
Description
No Description!
Coordinates
chr12:+:49425776..49426166
Molecular Weight (calculated)
10549.8 Da
IEP (calculated)
9.231
GRAVY (calculated)
-0.063
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MSVRIVTSLW DIIVDLFTDR CPLAYKNFLK LCKIKYYNNC LFHTVRKNIT NSKRGTAAMA VAGTGEKNLN ASQFYITLRD DLNSLDGEHA IFG
001: MSVLIVTSLG DIVIDLHSDK CPLTCKNFLK LCKIKYYNGC LFHTVQKDFT AQTGDPTGTG AGGDSIYKFL YGEQARFYKD EIHLDLKHSK TGTVAMASGG
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGK SFFFSPPYGI SDLL
101: ENLNASQFYF TLRDDLDYLD GKHTVFGQIA EGFDTLTRIN EAYVDPKNRP YKNIRIKHTH ILDDPFDDPP QLAEMMPDAS PEGKPKEEVK DDVRLEDDWV
201: PMDEELGAQE LEEVIREKAA HSSAVVLESI GDIPEAEVKP PDNVLFVCKL NPVTEDEDLH TIFSRFGTVV SADVIRDFKT GDSLCYAFIE FENKESCEQA
301: YFKMDNALID DRRIHVDFSQ SVSKLWSQFR QKDSQKGKGK SFFFSPPYGI SDLL
Arabidopsis Description
CYP59Peptidyl-prolyl cis-trans isomerase CYP59 [Source:UniProtKB/Swiss-Prot;Acc:Q6Q151]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.