Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055964 | Potato | nucleus | 79.33 | 79.33 |
| KRH52238 | Soybean | nucleus | 41.09 | 41.3 |
| KRH61567 | Soybean | mitochondrion, nucleus | 41.34 | 40.61 |
| VIT_04s0008g01700.t01 | Wine grape | nucleus | 43.41 | 39.53 |
| Solyc03g121970.1.1 | Tomato | nucleus | 39.28 | 37.25 |
| KRH05403 | Soybean | nucleus | 37.73 | 34.76 |
| KRH15613 | Soybean | nucleus | 36.18 | 34.57 |
| CDX97165 | Canola | cytosol, nucleus, peroxisome | 28.68 | 33.13 |
| CDX91176 | Canola | nucleus, plastid | 8.01 | 32.63 |
| Bra008918.1-P | Field mustard | nucleus | 28.17 | 32.06 |
| Bra006139.1-P | Field mustard | nucleus | 26.36 | 31.48 |
| CDX69710 | Canola | nucleus | 27.39 | 31.27 |
| CDX78464 | Canola | nucleus | 26.36 | 31.19 |
| CDX91175 | Canola | plastid | 12.14 | 30.72 |
| Bra023361.1-P | Field mustard | nucleus | 25.32 | 29.25 |
| AT5G12050.1 | Thale cress | nucleus | 26.87 | 28.73 |
| CDX85703 | Canola | plastid | 17.83 | 26.24 |
| CDX70442 | Canola | nucleus | 26.1 | 25.63 |
| Solyc07g041290.1.1 | Tomato | mitochondrion, nucleus | 16.02 | 20.06 |
Protein Annotations
| EnsemblPlants:Solyc08g062180.1.1 | EnsemblPlantsGene:Solyc08g062180.1 | PANTHER:PTHR33541 | PANTHER:PTHR33541:SF2 | SEG:seg | UniParc:UPI000276B0B1 |
| UniProt:K4CL07 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:50639008..50640171
Molecular Weight (calculated)
44073.2 Da
IEP (calculated)
9.025
GRAVY (calculated)
-0.928
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKDKLCRRH HKNPSFSSSL LDEIYRSIDG YDQRREDFKS ETRKQSNIGV KPKVVANIYN KKKSVEDEEI ASFRRACLIE KWMEKKVKDK TRRGPCNELD
101: SMNYDSLFFS STSSESNSGT LSASSSEPDS FYSEKSSTTT TCFAASKTRS IRRASVSPRR GTKLYSFDNQ QLQANKNEET NFIKSKSTAL KMYNNLKKVK
201: QPISPGGRLT NFLTSIFNNK SKNLKDPNRG DFHEVEERSS KSSSICSSFS RSCLSKTPPK FSQTTVKRTV RFNPVSVIVD EDCRPCGHKS IYGHDSDNLH
301: QPKSLGNAEK NRKFEVTKVD SYKKNDYIVD YIADEEEDDD AASCSSSDLF EIDHLAFFGN KRFCDELPVY ETTHVDTNRG IASGFIH
101: SMNYDSLFFS STSSESNSGT LSASSSEPDS FYSEKSSTTT TCFAASKTRS IRRASVSPRR GTKLYSFDNQ QLQANKNEET NFIKSKSTAL KMYNNLKKVK
201: QPISPGGRLT NFLTSIFNNK SKNLKDPNRG DFHEVEERSS KSSSICSSFS RSCLSKTPPK FSQTTVKRTV RFNPVSVIVD EDCRPCGHKS IYGHDSDNLH
301: QPKSLGNAEK NRKFEVTKVD SYKKNDYIVD YIADEEEDDD AASCSSSDLF EIDHLAFFGN KRFCDELPVY ETTHVDTNRG IASGFIH
001: MAFPQRKRTP SFSSSVLDSV YRSIDESDGL QSDLKGSINE NVSSSSSSPS PNKKDDKLTT LRRAIMDEEH WLYARSSTTT TNSSDSSSFS SSEAESYRTK
101: RRLRKLAEQG KRSGDERQRT KRTVMDNDSR LFSKSDDDKK PKAVKIIEEL KRSKQPVSPG ARLTSFLNSI FQSNAKKVKL CSVGKTTDVK SSSSKSCFSR
201: TRNKTDNNNN NCKKLERSIR FYPVRVTIDG DCRDYAQKHI TRVRKPIPEF TAKKSVKEEI KTNDHHTEFT CITRNIGLKD FVRSNKYEGK EEEEDAWSHS
301: SSDLFELDSY RIGMGRYLKE LPVYETTDFK TNQAIARSLL L
101: RRLRKLAEQG KRSGDERQRT KRTVMDNDSR LFSKSDDDKK PKAVKIIEEL KRSKQPVSPG ARLTSFLNSI FQSNAKKVKL CSVGKTTDVK SSSSKSCFSR
201: TRNKTDNNNN NCKKLERSIR FYPVRVTIDG DCRDYAQKHI TRVRKPIPEF TAKKSVKEEI KTNDHHTEFT CITRNIGLKD FVRSNKYEGK EEEEDAWSHS
301: SSDLFELDSY RIGMGRYLKE LPVYETTDFK TNQAIARSLL L
Arabidopsis Description
Protein BIG GRAIN 1-like C [Source:UniProtKB/Swiss-Prot;Acc:Q9M2B3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.