Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15613 | Soybean | nucleus | 74.76 | 77.53 |
| KRH52238 | Soybean | nucleus | 42.86 | 46.75 |
| KRH61567 | Soybean | mitochondrion, nucleus | 42.38 | 45.18 |
| Solyc08g062180.1.1 | Tomato | nucleus | 34.76 | 37.73 |
| VIT_04s0008g01700.t01 | Wine grape | nucleus | 38.1 | 37.65 |
| PGSC0003DMT400055964 | Potato | nucleus | 33.33 | 36.18 |
| CDX91176 | Canola | nucleus, plastid | 8.1 | 35.79 |
| KRH06149 | Soybean | nucleus | 35.71 | 34.8 |
| Bra006139.1-P | Field mustard | nucleus | 26.67 | 34.57 |
| KRH47572 | Soybean | nucleus | 35.0 | 34.19 |
| CDX78464 | Canola | nucleus | 26.43 | 33.95 |
| Bra008918.1-P | Field mustard | nucleus | 26.67 | 32.94 |
| CDX97165 | Canola | cytosol, nucleus, peroxisome | 26.19 | 32.84 |
| CDX69710 | Canola | nucleus | 26.43 | 32.74 |
| Bra023361.1-P | Field mustard | nucleus | 25.95 | 32.54 |
| CDX85703 | Canola | plastid | 20.0 | 31.94 |
| AT5G12050.1 | Thale cress | nucleus | 26.67 | 30.94 |
| CDX91175 | Canola | plastid | 11.19 | 30.72 |
| CDX70442 | Canola | nucleus | 26.43 | 28.17 |
| KRH19263 | Soybean | nucleus | 14.29 | 15.46 |
| KRH02643 | Soybean | nucleus | 14.76 | 15.2 |
Protein Annotations
| EMBL:ACUP02010736 | EnsemblPlants:KRH05403 | EnsemblPlantsGene:GLYMA_17G225300 | EntrezGene:100798431 | PANTHER:PTHR33541 | PANTHER:PTHR33541:SF2 |
| ProteinID:KRH05403 | ProteinID:KRH05403.1 | SEG:seg | UniParc:UPI000294A1AE | UniProt:K7MNE3 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr17:+:37839492..37840975
Molecular Weight (calculated)
47086.5 Da
IEP (calculated)
8.932
GRAVY (calculated)
-0.839
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIMYNLEKP QRDDKQFLTP SFSSTLLDQI YRSIDEGERK NGETKFYRHT TMSSSKRHNR SDSKSMDAGD RKIVGGAKNN NRKHLHRDED VMFFSSTSIS
101: STDSSSLGFS SSDTESISRA SCFAPQVGRG GGGSASFRSE KQGMRIFDSF CRTSSHRSSE HAHSQFCITS RRHLSVSEDH KQIRHGHRQV TACDEEEEAL
201: MIKSKSRALK IYNNLKKVKQ PISPGGRVTS FLNSLFANTK KTTTTTTSTS SRTCGEVNTP SSSSSCYYSS TCSSASSFSR SCLSKTMSSE RDRLRNGVKR
301: TVRFYPVSVI VGEDSRPCGH KRLCEEKEAS REFLREYNNR HNPKIKSNDK LVLKDLSLRT TNVDVDDNDD DDDASSYASS DLFELDHLAV FGSDRYSEEL
401: PVYETTHVST NRAIANGLIV
101: STDSSSLGFS SSDTESISRA SCFAPQVGRG GGGSASFRSE KQGMRIFDSF CRTSSHRSSE HAHSQFCITS RRHLSVSEDH KQIRHGHRQV TACDEEEEAL
201: MIKSKSRALK IYNNLKKVKQ PISPGGRVTS FLNSLFANTK KTTTTTTSTS SRTCGEVNTP SSSSSCYYSS TCSSASSFSR SCLSKTMSSE RDRLRNGVKR
301: TVRFYPVSVI VGEDSRPCGH KRLCEEKEAS REFLREYNNR HNPKIKSNDK LVLKDLSLRT TNVDVDDNDD DDDASSYASS DLFELDHLAV FGSDRYSEEL
401: PVYETTHVST NRAIANGLIV
001: MEITWEKPKS SSHHRNPSFS STLLDQIYRS IDDSSPPPPL ESIKKKKHHH QQRNASLHED REISPIYHRR SIAADFERSR RKTDFLRHSN SSSSDSSGFS
101: SSESDSFHGR SKSSASPPSS SRQQPKPIRT SSVDHSSAVQ KPKELGGFLR TKSKALKIYS DLKKVKQPIS PGGRLATFLN SLFTNAATNP KKHKKTTTVA
201: VVEEPHSSST CSSASSFSRS CLSKTPSSSG KSKRSVRFCP VNVILDEDSS FTMPYAYNNE RLYDNNEAKR VEEHRRVIQA AKDLLRTYHN KNKVTTTNIN
301: NVEEDDEDDA ASCASSDLFE LENLSAIGIE RYREELPVYE TTRLDNMNRV IATGLIV
101: SSESDSFHGR SKSSASPPSS SRQQPKPIRT SSVDHSSAVQ KPKELGGFLR TKSKALKIYS DLKKVKQPIS PGGRLATFLN SLFTNAATNP KKHKKTTTVA
201: VVEEPHSSST CSSASSFSRS CLSKTPSSSG KSKRSVRFCP VNVILDEDSS FTMPYAYNNE RLYDNNEAKR VEEHRRVIQA AKDLLRTYHN KNKVTTTNIN
301: NVEEDDEDDA ASCASSDLFE LENLSAIGIE RYREELPVYE TTRLDNMNRV IATGLIV
Arabidopsis Description
Protein BIG GRAIN 1-like A [Source:UniProtKB/Swiss-Prot;Acc:Q9LVK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.