Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05403 | Soybean | nucleus | 77.53 | 74.76 |
| KRH52238 | Soybean | nucleus | 43.21 | 45.45 |
| KRH61567 | Soybean | mitochondrion, nucleus | 41.73 | 42.89 |
| CDX91176 | Canola | nucleus, plastid | 8.64 | 36.84 |
| VIT_04s0008g01700.t01 | Wine grape | nucleus | 38.27 | 36.47 |
| Solyc08g062180.1.1 | Tomato | nucleus | 34.57 | 36.18 |
| PGSC0003DMT400055964 | Potato | nucleus | 32.84 | 34.37 |
| KRH06149 | Soybean | nucleus | 34.81 | 32.71 |
| KRH47572 | Soybean | nucleus | 34.57 | 32.56 |
| Bra006139.1-P | Field mustard | nucleus | 25.93 | 32.41 |
| CDX97165 | Canola | cytosol, nucleus, peroxisome | 26.67 | 32.24 |
| CDX78464 | Canola | nucleus | 25.93 | 32.11 |
| Bra008918.1-P | Field mustard | nucleus | 26.91 | 32.06 |
| CDX69710 | Canola | nucleus | 26.67 | 31.86 |
| CDX91175 | Canola | plastid | 11.85 | 31.37 |
| Bra023361.1-P | Field mustard | nucleus | 25.43 | 30.75 |
| CDX85703 | Canola | plastid | 19.75 | 30.42 |
| AT5G12050.1 | Thale cress | nucleus | 26.91 | 30.11 |
| CDX70442 | Canola | nucleus | 25.93 | 26.65 |
| KRH02643 | Soybean | nucleus | 14.81 | 14.71 |
| KRH19263 | Soybean | nucleus | 14.07 | 14.69 |
Protein Annotations
| EMBL:ACUP02008622 | EnsemblPlants:KRH15613 | EnsemblPlantsGene:GLYMA_14G099400 | EntrezGene:100795554 | PANTHER:PTHR33541 | PANTHER:PTHR33541:SF2 |
| ProteinID:KRH15613 | ProteinID:KRH15613.1 | SEG:seg | UniParc:UPI000233B884 | UniProt:K7M5Y9 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr14:-:9649613..9650830
Molecular Weight (calculated)
45253.4 Da
IEP (calculated)
8.934
GRAVY (calculated)
-0.827
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MYHLEKPQRD DKQFLTPSFS STLLDQIYRS IDEGERKNGE IKFYRHTTMS TSKRQSRSNS KSMDAGDRKI VRAKNGRKKL HCDEDIMFFS STSISSTDSS
101: SLGFSSSDTE SISRASCFAP RVGRRGGGSA SFRSEKQGMR VLDGFCRNSS HRSKHAHSPL PVSSRHHVSV SEQQRHEHVT ACDEEALMIK SKSRALRIYN
201: NLKKVKQPLS PGGRVTSFLN SLFANTKKTT STTSRSCGEG NAPSSSSSCY YSSTCSSASS FSRSCLSKTM SSERDRLRNG VKRTVRFYPV SVIVDEDSRP
301: CGDKRLCEEE EASGEFLREY NRHNSKIKSN DNLVLKDLPL RKTNLVEDGD DNDDHDDDAS SYASSDLFEL DHLAVFGSGR YSEELPVYET THVSTNRAIA
401: NGLIV
101: SLGFSSSDTE SISRASCFAP RVGRRGGGSA SFRSEKQGMR VLDGFCRNSS HRSKHAHSPL PVSSRHHVSV SEQQRHEHVT ACDEEALMIK SKSRALRIYN
201: NLKKVKQPLS PGGRVTSFLN SLFANTKKTT STTSRSCGEG NAPSSSSSCY YSSTCSSASS FSRSCLSKTM SSERDRLRNG VKRTVRFYPV SVIVDEDSRP
301: CGDKRLCEEE EASGEFLREY NRHNSKIKSN DNLVLKDLPL RKTNLVEDGD DNDDHDDDAS SYASSDLFEL DHLAVFGSGR YSEELPVYET THVSTNRAIA
401: NGLIV
001: MAFPQRKRTP SFSSSVLDSV YRSIDESDGL QSDLKGSINE NVSSSSSSPS PNKKDDKLTT LRRAIMDEEH WLYARSSTTT TNSSDSSSFS SSEAESYRTK
101: RRLRKLAEQG KRSGDERQRT KRTVMDNDSR LFSKSDDDKK PKAVKIIEEL KRSKQPVSPG ARLTSFLNSI FQSNAKKVKL CSVGKTTDVK SSSSKSCFSR
201: TRNKTDNNNN NCKKLERSIR FYPVRVTIDG DCRDYAQKHI TRVRKPIPEF TAKKSVKEEI KTNDHHTEFT CITRNIGLKD FVRSNKYEGK EEEEDAWSHS
301: SSDLFELDSY RIGMGRYLKE LPVYETTDFK TNQAIARSLL L
101: RRLRKLAEQG KRSGDERQRT KRTVMDNDSR LFSKSDDDKK PKAVKIIEEL KRSKQPVSPG ARLTSFLNSI FQSNAKKVKL CSVGKTTDVK SSSSKSCFSR
201: TRNKTDNNNN NCKKLERSIR FYPVRVTIDG DCRDYAQKHI TRVRKPIPEF TAKKSVKEEI KTNDHHTEFT CITRNIGLKD FVRSNKYEGK EEEEDAWSHS
301: SSDLFELDSY RIGMGRYLKE LPVYETTDFK TNQAIARSLL L
Arabidopsis Description
Protein BIG GRAIN 1-like C [Source:UniProtKB/Swiss-Prot;Acc:Q9M2B3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.