Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 2
- nucleus 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc12g089030.1.1 | Tomato | cytosol | 82.5 | 36.07 |
Solyc04g079970.2.1 | Tomato | cytosol | 77.5 | 33.88 |
TraesCS5D01G187200.1 | Wheat | cytosol | 68.75 | 30.05 |
TraesCS5A01G182800.1 | Wheat | cytosol | 68.75 | 30.05 |
TraesCS5B01G180900.1 | Wheat | cytosol | 67.5 | 29.51 |
EER88903 | Sorghum | cytosol | 66.25 | 28.96 |
TraesCS6D01G019200.1 | Wheat | cytosol | 66.25 | 28.96 |
TraesCS6B01G023900.1 | Wheat | cytosol | 66.25 | 28.96 |
HORVU5Hr1G055840.2 | Barley | cytosol | 66.25 | 28.96 |
TraesCS6A01G016200.1 | Wheat | cytosol | 66.25 | 28.96 |
Os10t0190000-02 | Rice | cytosol, nucleus | 65.0 | 28.26 |
HORVU6Hr1G003170.2 | Barley | mitochondrion | 66.25 | 28.19 |
GSMUA_Achr6P08850_001 | Banana | cytosol | 62.5 | 27.32 |
Zm00001d036481_P001 | Maize | cytosol | 67.5 | 27.14 |
GSMUA_Achr3P13610_001 | Banana | cytosol | 61.25 | 26.78 |
Os09t0321900-01 | Rice | plastid | 58.75 | 25.68 |
EES13692 | Sorghum | cytosol | 57.5 | 25.14 |
Os08t0374100-01 | Rice | cytosol, nucleus | 66.25 | 22.84 |
GSMUA_Achr2P23180_001 | Banana | cytosol | 65.0 | 21.14 |
Solyc02g085690.2.1 | Tomato | extracellular, vacuole | 57.5 | 20.35 |
Solyc06g007500.1.1 | Tomato | cytosol | 58.75 | 17.94 |
Zm00001d014671_P001 | Maize | nucleus | 66.25 | 11.23 |
Protein Annotations
Gene3D:3.10.110.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0016740 | GO:GO:0019538 | GO:GO:0019788 | GO:GO:0045116 | InterPro:IPR000608 | InterPro:IPR016135 |
UniProt:K4CZG1 | PFAM:PF00179 | PANTHER:PTHR43953 | PANTHER:PTHR43953:SF4 | SUPFAM:SSF54495 | EnsemblPlantsGene:Solyc10g039370.1 |
EnsemblPlants:Solyc10g039370.1.1 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000276AFEB | : | : |
Description
No Description!
Coordinates
chr10:+:21456772..21458984
Molecular Weight (calculated)
9001.8 Da
IEP (calculated)
4.964
GRAVY (calculated)
-0.280
Length
80 amino acids
Sequence
(BLAST)
(BLAST)
1: MECPLPPPPR YISELNLPET CSISFPNGKD DLMNFEVTIR PDEGYYVGGT FVFSFSISSI YPPEAPKVKC KTKVGTFSRY
001: MIGLFKVKEK QREESQSNNG RGASTVKKQS AGELRLHKDI SELNLPKSCK ISFPNGKNDL MNFEVTIKPD EGYYLSGNFV FSFQVSNMYP HEAPKVKCKT
101: KVYHPNIDLE GNVCLNILRE DWKPVLNINT VIYGLFHLFT EPNYEDPLNH EAAAVLRDNP KTFEYNVRRA MMGGQVGQTS FPRCM
101: KVYHPNIDLE GNVCLNILRE DWKPVLNINT VIYGLFHLFT EPNYEDPLNH EAAAVLRDNP KTFEYNVRRA MMGGQVGQTS FPRCM
Arabidopsis Description
RCE2Probable NEDD8-conjugating enzyme Ubc12-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU75]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.