Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G161200.3 | Wheat | nucleus | 97.98 | 99.04 |
| TraesCS1A01G164200.3 | Wheat | nucleus | 95.6 | 95.6 |
| HORVU1Hr1G043680.7 | Barley | nucleus | 88.35 | 91.17 |
| Os10t0495000-01 | Rice | nucleus | 68.01 | 75.07 |
| KXG38256 | Sorghum | nucleus | 67.18 | 70.62 |
| Zm00001d013963_P002 | Maize | nucleus | 65.76 | 67.77 |
| Zm00001d032597_P006 | Maize | golgi, plasma membrane | 66.59 | 56.8 |
| GSMUA_Achr3P21030_001 | Banana | nucleus | 38.53 | 48.65 |
| VIT_14s0006g02960.t01 | Wine grape | nucleus, plastid | 31.27 | 38.91 |
| TraesCS4B01G166500.2 | Wheat | nucleus | 22.35 | 33.39 |
| Solyc03g034200.2.1 | Tomato | nucleus | 27.35 | 32.53 |
| TraesCS3B01G580700.1 | Wheat | nucleus | 20.57 | 27.42 |
| TraesCS5B01G551800.1 | Wheat | nucleus | 20.45 | 27.26 |
| TraesCS5B01G276400.1 | Wheat | plastid | 19.02 | 25.6 |
| TraesCS3B01G189700.1 | Wheat | nucleus | 19.14 | 22.74 |
| TraesCS1B01G229900.1 | Wheat | cytosol | 11.77 | 22.05 |
| TraesCS7B01G245400.2 | Wheat | nucleus | 18.43 | 21.83 |
| TraesCS4B01G069700.1 | Wheat | nucleus | 11.53 | 18.98 |
| TraesCS6B01G113100.1 | Wheat | cytosol | 10.11 | 18.2 |
| TraesCS5B01G066800.1 | Wheat | nucleus | 10.58 | 17.12 |
| TraesCS1B01G155000.1 | Wheat | cytosol, mitochondrion, nucleus | 11.3 | 15.86 |
Protein Annotations
| Gene3D:2.150.10.10 | Gene3D:3.30.1370.10 | Gene3D:3.30.310.210 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR011049 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 |
| InterPro:KH_dom_type_1_sf | PFAM:PF00013 | PFscan:PS50084 | PANTHER:PTHR10288 | PANTHER:PTHR10288:SF130 | SMART:SM00322 |
| SUPFAM:SSF51120 | SUPFAM:SSF54791 | InterPro:Serralysin-like_metalloprot_C | EnsemblPlantsGene:TraesCS1B01G181000 | EnsemblPlants:TraesCS1B01G181000.3 | TIGR:cd00105 |
| TIGR:cd02396 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:327575252..327579098
Molecular Weight (calculated)
92345.5 Da
IEP (calculated)
7.889
GRAVY (calculated)
-0.695
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSLCRLMD YDNSRRHNQS TSKKRTRFNS DDGKRKRLNY RQDGGHMSSQ PIETVYRILC PGKKIGGVLG RGGHVVKALR EETKAKIRVA DSIPGADERV
101: IIIFDYQNNS DQAIQNISNV DGSENMKPRC FAQDALLKIH DKIAADEDSN DGVSYENSET AGDVTARILV PGNQVGCLLG KGGSIIQQLR NDTGAGIRVL
201: PSENLPQCAL KSDELVQISG APSLVRKALY EISTRLHRHP RKENPSLEEI IDASTQRKRE SPPPLPHENH MLPHLHVDHP PPMPLLDPYR NGPLQYPVPE
301: PEEFSIKILC PSELIGPVIG RSGANVRQVE QQTGARIMVQ ELPKDASGER LIVISSKEIP ADPVSPTIEA LILLHSKVSE SKVSEPSVSA PSESAPSEEH
401: NLVTRLVVPS RKVGCIIGEG GKVITEMRRR IGAEIRVYSK ADKPKYLSFH DELVQVSGSP DIARKAITEI ASRLRDRILR DGISSFDGPP ADIFPSREFT
501: LYGRPANPPY GRLANDAPYG RPADDTPYGR PANDTPYGRP ANDSPYQRRL AIDQPYGLAS DSLYGRPAND PLYGRPANDP LYGRPANDPP YGRPANDTPY
601: GRPANDTPYG RPANDAPYGR PNNKPHDSVD YFSKRREYPS GSPFASDAPP SASYDRYAAS ARLPTREMPL PVSPGADYMS HRSYHDHMPT DSYSSRGIQQ
701: LGLSRTGNSN MQQLGVTRAG NSNAYDYTEA AGQMHGREDY QRAADVTGYS SSSVELRIPN SSLESIVGAG GVNLAEIRQI SGARMKLLEA RPGSSESIME
801: IQGMPDQVRV AQSLLQGFIG ANSQSVQPSQ SSRDVHYPRW N
101: IIIFDYQNNS DQAIQNISNV DGSENMKPRC FAQDALLKIH DKIAADEDSN DGVSYENSET AGDVTARILV PGNQVGCLLG KGGSIIQQLR NDTGAGIRVL
201: PSENLPQCAL KSDELVQISG APSLVRKALY EISTRLHRHP RKENPSLEEI IDASTQRKRE SPPPLPHENH MLPHLHVDHP PPMPLLDPYR NGPLQYPVPE
301: PEEFSIKILC PSELIGPVIG RSGANVRQVE QQTGARIMVQ ELPKDASGER LIVISSKEIP ADPVSPTIEA LILLHSKVSE SKVSEPSVSA PSESAPSEEH
401: NLVTRLVVPS RKVGCIIGEG GKVITEMRRR IGAEIRVYSK ADKPKYLSFH DELVQVSGSP DIARKAITEI ASRLRDRILR DGISSFDGPP ADIFPSREFT
501: LYGRPANPPY GRLANDAPYG RPADDTPYGR PANDTPYGRP ANDSPYQRRL AIDQPYGLAS DSLYGRPAND PLYGRPANDP LYGRPANDPP YGRPANDTPY
601: GRPANDTPYG RPANDAPYGR PNNKPHDSVD YFSKRREYPS GSPFASDAPP SASYDRYAAS ARLPTREMPL PVSPGADYMS HRSYHDHMPT DSYSSRGIQQ
701: LGLSRTGNSN MQQLGVTRAG NSNAYDYTEA AGQMHGREDY QRAADVTGYS SSSVELRIPN SSLESIVGAG GVNLAEIRQI SGARMKLLEA RPGSSESIME
801: IQGMPDQVRV AQSLLQGFIG ANSQSVQPSQ SSRDVHYPRW N
001: MASTLRNIHD QNVIASEDTV YRYLCPVKKT GSIIGKGGEI AKQIRSETKS NMRINEALPG CEERVVTMYS TNEELNHFGD DGELVCPALD ALFKVHDMVV
101: ADADQDDGTD DDNDLGEKQT VTVRMLVPSD QIGCVIGKGG QVIQNLRNDT NAQIRVIKDH LPACALTLSH DELLLIIGEP LVVREALYQV ASLLHDNPSR
201: FQHLLLSSSS SSMHQPGAML MSAALTSSHR NYAVRRDIAD AREFCVCFIC PAENVGGVIG KGGGFINQIR QETGATIRVN TSETDDDDCI IFISSKEFYE
301: DQSPAVNAAI RLQQRCSEKV GKDANDLAIS TRLLVSSSQI GCLIGKGGAV ISEMRSVTRA NIRILQKEDV PKIAREDEEM VQITGSPDAA MKALTQVILR
401: LRANSFDMDH GLVLLPTSFP YIPQVTESSS KSKYAKRDDH SKLNSNSKRR NHVS
101: ADADQDDGTD DDNDLGEKQT VTVRMLVPSD QIGCVIGKGG QVIQNLRNDT NAQIRVIKDH LPACALTLSH DELLLIIGEP LVVREALYQV ASLLHDNPSR
201: FQHLLLSSSS SSMHQPGAML MSAALTSSHR NYAVRRDIAD AREFCVCFIC PAENVGGVIG KGGGFINQIR QETGATIRVN TSETDDDDCI IFISSKEFYE
301: DQSPAVNAAI RLQQRCSEKV GKDANDLAIS TRLLVSSSQI GCLIGKGGAV ISEMRSVTRA NIRILQKEDV PKIAREDEEM VQITGSPDAA MKALTQVILR
401: LRANSFDMDH GLVLLPTSFP YIPQVTESSS KSKYAKRDDH SKLNSNSKRR NHVS
Arabidopsis Description
F7A19.25 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.