Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1A01G164200.3 | Wheat | nucleus | 91.41 | 88.58 |
TraesCS1D01G161200.3 | Wheat | nucleus | 90.31 | 88.46 |
TraesCS1B01G181000.3 | Wheat | nucleus | 91.17 | 88.35 |
Os10t0495000-01 | Rice | nucleus | 68.83 | 73.62 |
KXG38256 | Sorghum | nucleus | 66.87 | 68.12 |
Zm00001d013963_P002 | Maize | nucleus | 65.52 | 65.44 |
Zm00001d032597_P006 | Maize | golgi, plasma membrane | 66.87 | 55.27 |
GSMUA_Achr3P21030_001 | Banana | nucleus | 40.25 | 49.25 |
VIT_14s0006g02960.t01 | Wine grape | nucleus, plastid | 32.15 | 38.76 |
HORVU4Hr1G049680.1 | Barley | nucleus | 23.07 | 32.3 |
Solyc03g034200.2.1 | Tomato | nucleus | 27.36 | 31.54 |
HORVU0Hr1G007380.3 | Barley | mitochondrion, nucleus | 21.47 | 27.69 |
HORVU5Hr1G121900.1 | Barley | nucleus | 20.98 | 27.06 |
HORVU1Hr1G036300.1 | Barley | cytosol | 5.52 | 24.73 |
HORVU5Hr1G075110.3 | Barley | mitochondrion | 19.51 | 24.69 |
HORVU7Hr1G082230.1 | Barley | nucleus | 18.65 | 24.28 |
HORVU3Hr1G057270.16 | Barley | plastid | 19.75 | 20.75 |
HORVU1Hr1G055480.1 | Barley | plastid | 11.53 | 18.73 |
HORVU6Hr1G014510.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 10.06 | 16.57 |
HORVU4Hr1G011610.11 | Barley | cytoskeleton, cytosol, nucleus | 10.67 | 16.05 |
HORVU1Hr1G036280.1 | Barley | cytosol | 5.77 | 11.46 |
Protein Annotations
Gene3D:2.150.10.10 | Gene3D:3.30.1370.10 | Gene3D:3.30.310.210 | MapMan:35.1 | UniProt:A0A287FBZ2 | ncoils:Coil |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:HORVU1Hr1G043680 | EnsemblPlants:HORVU1Hr1G043680.7 |
InterPro:IPR011049 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PFAM:PF00013 |
PFscan:PS50084 | PANTHER:PTHR10288 | PANTHER:PTHR10288:SF130 | SMART:SM00322 | SUPFAM:SSF51120 | SUPFAM:SSF54791 |
InterPro:Serralysin-like_metalloprot_C | UniParc:UPI000B46A456 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:317348713..317352921
Molecular Weight (calculated)
89449.6 Da
IEP (calculated)
7.916
GRAVY (calculated)
-0.627
Length
815 amino acids
Sequence
(BLAST)
(BLAST)
001: ELWMKPLMDN SRRHNPSTSK KRTRFNSDDG KRKRLNYRQD DGPMSSQPIE TVYRILCPGN KIGGILGRGG HVVNALRDET KAKIRVADSI PGADERVIII
101: FDYQNNSKQA VEAIQNNIDG LENMKPHCFA QDALLKIHDK IAADEDPNDG VICENSETAG HVTARILVPG NQVGCLLGKG GSIIQQLRND TGAGIRVLPS
201: ENLPQCALKS DELVQISGAA SLVRKALYEI STRLHMHPRK ENPPLEEIID ASTQRKRGSP PPIPHENHML PHLHVDHPPP MPLLDPYRNR PLQYPVPEPE
301: EFSIRILCAS ELIGPVIGRS GANVRQVEQQ TGARIVVQEL HKDASGERLI VISSKEIPAD PVSPTIEALI LLHSKVSASK VSEPSESEPS EEHKLVTRLV
401: VPSKKVGCIL GEGGKVITEM RRRIGAEIRV YSKADKPKYL SFNEELVQVS GSPDIAREAL TEIASRLRDR ILRDGISSFD GPPADIFPSR EFTQYGRPVN
501: PPYGRLANDT PYGRLANDTP YGRLAHDTPY GRPANDSPYQ RRLAIDQPYG LASDSLYGRP ANDPLYGRPA NDPPYGGPAN DTAYGRPAND TLYGRPNNKP
601: HDSVDYFSKR RAYPNGSPFA SDAPPSASYD RYAGSTRLPT REMPLPVSPG ADYMPHRSHH DHMPTDSYAS RGMQQLGLSR AGNSTMQQLG VTRAGNSNAY
701: DYTEAAGQMH GREDYQRAAD VTGYSSSSVE LRIPNSSLES VVGAGGVNLA EIRQISGARM KLLEARPGSS ESIMEIQGMA HQVRVAQSLL QGFIGANSQS
801: AQPSQSSRDL YPVWN
101: FDYQNNSKQA VEAIQNNIDG LENMKPHCFA QDALLKIHDK IAADEDPNDG VICENSETAG HVTARILVPG NQVGCLLGKG GSIIQQLRND TGAGIRVLPS
201: ENLPQCALKS DELVQISGAA SLVRKALYEI STRLHMHPRK ENPPLEEIID ASTQRKRGSP PPIPHENHML PHLHVDHPPP MPLLDPYRNR PLQYPVPEPE
301: EFSIRILCAS ELIGPVIGRS GANVRQVEQQ TGARIVVQEL HKDASGERLI VISSKEIPAD PVSPTIEALI LLHSKVSASK VSEPSESEPS EEHKLVTRLV
401: VPSKKVGCIL GEGGKVITEM RRRIGAEIRV YSKADKPKYL SFNEELVQVS GSPDIAREAL TEIASRLRDR ILRDGISSFD GPPADIFPSR EFTQYGRPVN
501: PPYGRLANDT PYGRLANDTP YGRLAHDTPY GRPANDSPYQ RRLAIDQPYG LASDSLYGRP ANDPLYGRPA NDPPYGGPAN DTAYGRPAND TLYGRPNNKP
601: HDSVDYFSKR RAYPNGSPFA SDAPPSASYD RYAGSTRLPT REMPLPVSPG ADYMPHRSHH DHMPTDSYAS RGMQQLGLSR AGNSTMQQLG VTRAGNSNAY
701: DYTEAAGQMH GREDYQRAAD VTGYSSSSVE LRIPNSSLES VVGAGGVNLA EIRQISGARM KLLEARPGSS ESIMEIQGMA HQVRVAQSLL QGFIGANSQS
801: AQPSQSSRDL YPVWN
001: MASTLRNIHD TVYRYLCPVK KTGSIIGKGG EIAKQIRSET KSNMRINEAL PGCEERVVTM YSTNEELNHF GDDGELVCPA LDALFKVHDM VVADADQDDG
101: TDDDNDLGEK QTVTVRMLVP SDQIGCVIGK GGQVIQNLRN DTNAQIRVIK DHLPACALTL SHDELLLIIG EPLVVREALY QVASLLHDNP SRFQHLLLSS
201: SSSSMHQPGA MLMSAALTSS HRNYAVRRDI ADAREFCVCF ICPAENVGGV IGKGGGFINQ IRQETGATIR VNTSETDDDD CIIFISSKEF YEDQSPAVNA
301: AIRLQQRCSE KVGKDANDLA ISTRLLVSSS QIGCLIGKGG AVISEMRSVT RANIRILQKE DVPKIAREDE EMVQITGSPD AAMKALTQVI LRLRANSFDM
401: DHGLVLLPTS FPYIPQVTES SSKSKYAKRD DHSKLNSNSK RRNHVS
101: TDDDNDLGEK QTVTVRMLVP SDQIGCVIGK GGQVIQNLRN DTNAQIRVIK DHLPACALTL SHDELLLIIG EPLVVREALY QVASLLHDNP SRFQHLLLSS
201: SSSSMHQPGA MLMSAALTSS HRNYAVRRDI ADAREFCVCF ICPAENVGGV IGKGGGFINQ IRQETGATIR VNTSETDDDD CIIFISSKEF YEDQSPAVNA
301: AIRLQQRCSE KVGKDANDLA ISTRLLVSSS QIGCLIGKGG AVISEMRSVT RANIRILQKE DVPKIAREDE EMVQITGSPD AAMKALTQVI LRLRANSFDM
401: DHGLVLLPTS FPYIPQVTES SSKSKYAKRD DHSKLNSNSK RRNHVS
Arabidopsis Description
F7A19.25 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.