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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G164200.3 Wheat nucleus 91.41 88.58
TraesCS1D01G161200.3 Wheat nucleus 90.31 88.46
TraesCS1B01G181000.3 Wheat nucleus 91.17 88.35
Os10t0495000-01 Rice nucleus 68.83 73.62
KXG38256 Sorghum nucleus 66.87 68.12
Zm00001d013963_P002 Maize nucleus 65.52 65.44
Zm00001d032597_P006 Maize golgi, plasma membrane 66.87 55.27
GSMUA_Achr3P21030_001 Banana nucleus 40.25 49.25
VIT_14s0006g02960.t01 Wine grape nucleus, plastid 32.15 38.76
HORVU4Hr1G049680.1 Barley nucleus 23.07 32.3
Solyc03g034200.2.1 Tomato nucleus 27.36 31.54
HORVU0Hr1G007380.3 Barley mitochondrion, nucleus 21.47 27.69
HORVU5Hr1G121900.1 Barley nucleus 20.98 27.06
HORVU1Hr1G036300.1 Barley cytosol 5.52 24.73
HORVU5Hr1G075110.3 Barley mitochondrion 19.51 24.69
HORVU7Hr1G082230.1 Barley nucleus 18.65 24.28
HORVU3Hr1G057270.16 Barley plastid 19.75 20.75
HORVU1Hr1G055480.1 Barley plastid 11.53 18.73
HORVU6Hr1G014510.1 Barley cytosol, mitochondrion, nucleus, plastid 10.06 16.57
HORVU4Hr1G011610.11 Barley cytoskeleton, cytosol, nucleus 10.67 16.05
HORVU1Hr1G036280.1 Barley cytosol 5.77 11.46
Protein Annotations
Gene3D:2.150.10.10Gene3D:3.30.1370.10Gene3D:3.30.310.210MapMan:35.1UniProt:A0A287FBZ2ncoils:Coil
GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0005488EnsemblPlantsGene:HORVU1Hr1G043680EnsemblPlants:HORVU1Hr1G043680.7
InterPro:IPR011049InterPro:IPR036612InterPro:KH_domInterPro:KH_dom_type_1InterPro:KH_dom_type_1_sfPFAM:PF00013
PFscan:PS50084PANTHER:PTHR10288PANTHER:PTHR10288:SF130SMART:SM00322SUPFAM:SSF51120SUPFAM:SSF54791
InterPro:Serralysin-like_metalloprot_CUniParc:UPI000B46A456SEG:seg:::
Description
No Description!
Coordinates
chrchr1H:-:317348713..317352921
Molecular Weight (calculated)
89449.6 Da
IEP (calculated)
7.916
GRAVY (calculated)
-0.627
Length
815 amino acids
Sequence
(BLAST)
001: ELWMKPLMDN SRRHNPSTSK KRTRFNSDDG KRKRLNYRQD DGPMSSQPIE TVYRILCPGN KIGGILGRGG HVVNALRDET KAKIRVADSI PGADERVIII
101: FDYQNNSKQA VEAIQNNIDG LENMKPHCFA QDALLKIHDK IAADEDPNDG VICENSETAG HVTARILVPG NQVGCLLGKG GSIIQQLRND TGAGIRVLPS
201: ENLPQCALKS DELVQISGAA SLVRKALYEI STRLHMHPRK ENPPLEEIID ASTQRKRGSP PPIPHENHML PHLHVDHPPP MPLLDPYRNR PLQYPVPEPE
301: EFSIRILCAS ELIGPVIGRS GANVRQVEQQ TGARIVVQEL HKDASGERLI VISSKEIPAD PVSPTIEALI LLHSKVSASK VSEPSESEPS EEHKLVTRLV
401: VPSKKVGCIL GEGGKVITEM RRRIGAEIRV YSKADKPKYL SFNEELVQVS GSPDIAREAL TEIASRLRDR ILRDGISSFD GPPADIFPSR EFTQYGRPVN
501: PPYGRLANDT PYGRLANDTP YGRLAHDTPY GRPANDSPYQ RRLAIDQPYG LASDSLYGRP ANDPLYGRPA NDPPYGGPAN DTAYGRPAND TLYGRPNNKP
601: HDSVDYFSKR RAYPNGSPFA SDAPPSASYD RYAGSTRLPT REMPLPVSPG ADYMPHRSHH DHMPTDSYAS RGMQQLGLSR AGNSTMQQLG VTRAGNSNAY
701: DYTEAAGQMH GREDYQRAAD VTGYSSSSVE LRIPNSSLES VVGAGGVNLA EIRQISGARM KLLEARPGSS ESIMEIQGMA HQVRVAQSLL QGFIGANSQS
801: AQPSQSSRDL YPVWN
Best Arabidopsis Sequence Match ( AT1G14170.2 )
(BLAST)
001: MASTLRNIHD TVYRYLCPVK KTGSIIGKGG EIAKQIRSET KSNMRINEAL PGCEERVVTM YSTNEELNHF GDDGELVCPA LDALFKVHDM VVADADQDDG
101: TDDDNDLGEK QTVTVRMLVP SDQIGCVIGK GGQVIQNLRN DTNAQIRVIK DHLPACALTL SHDELLLIIG EPLVVREALY QVASLLHDNP SRFQHLLLSS
201: SSSSMHQPGA MLMSAALTSS HRNYAVRRDI ADAREFCVCF ICPAENVGGV IGKGGGFINQ IRQETGATIR VNTSETDDDD CIIFISSKEF YEDQSPAVNA
301: AIRLQQRCSE KVGKDANDLA ISTRLLVSSS QIGCLIGKGG AVISEMRSVT RANIRILQKE DVPKIAREDE EMVQITGSPD AAMKALTQVI LRLRANSFDM
401: DHGLVLLPTS FPYIPQVTES SSKSKYAKRD DHSKLNSNSK RRNHVS
Arabidopsis Description
F7A19.25 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI71]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.