Factsheet for HORVU5Hr1G075110.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G089690.1
HORVU5Hr1G000950.4
HORVU5Hr1G029670.1
HORVU6Hr1G038430.3
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1
HORVU7Hr1G090240.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51580.1	HORVU1Hr1G089690.1	AT2G25490.1	21798944
AT1G51580.1	HORVU5Hr1G000950.4	AT2G25490.1	21798944
AT1G51580.1	HORVU5Hr1G029670.1	AT2G25490.1	21798944
AT1G51580.1	HORVU6Hr1G038430.3	AT2G25490.1	21798944
AT1G51580.1	HORVU7Hr1G090240.1	AT2G25490.1	21798944
AT1G51580.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT1G51580.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G276400.1	Wheat	plastid	92.7	95.52
TraesCS5D01G284200.4	Wheat	plastid	92.55	95.06
TraesCS5A01G276800.5	Wheat	plastid	92.08	94.58
KXG35952	Sorghum	plastid	76.55	79.26
Os09t0498600-01	Rice	plastid	75.78	79.22
Zm00001d006055_P002	Maize	plastid	75.0	77.4
GSMUA_Achr10P...	Banana	nucleus	45.81	43.77
Solyc12g055780.1.1	Tomato	cytosol, nucleus	24.22	42.16
KRH44614	Soybean	mitochondrion, nucleus	36.34	41.42
KRH47290	Soybean	mitochondrion, nucleus	35.87	41.32
PGSC0003DMT400074198	Potato	plastid	28.26	40.99
VIT_09s0054g00450.t01	Wine grape	plastid	41.93	38.35
AT1G51580.1	Thale cress	cytosol, plastid	33.7	34.94
Bra014290.1-P	Field mustard	plastid	29.5	32.7
CDY46555	Canola	plastid	29.5	32.7
CDY52947	Canola	plastid	29.19	32.64
Solyc12g055790.1.1	Tomato	nucleus	10.25	26.51
PGSC0003DMT400087680	Potato	plastid	10.09	26.1
HORVU0Hr1G007380.3	Barley	mitochondrion, nucleus	22.83	23.26
HORVU4Hr1G049680.1	Barley	nucleus	20.81	23.02
HORVU5Hr1G121900.1	Barley	nucleus	22.36	22.78
HORVU7Hr1G082230.1	Barley	nucleus	22.05	22.68
HORVU3Hr1G057270.16	Barley	plastid	25.78	21.39
HORVU1Hr1G043680.7	Barley	nucleus	24.69	19.51
HORVU1Hr1G055480.1	Barley	plastid	10.87	13.94
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	10.71	12.73
HORVU1Hr1G036280.1	Barley	cytosol	7.76	12.2
HORVU6Hr1G014510.1	Barley	cytosol, mitochondrion, nucleus, plastid	9.16	11.92
HORVU1Hr1G036300.1	Barley	cytosol	2.8	9.89

Protein Annotations

EnsemblPlants:HORVU5Hr1G075110.3	EnsemblPlantsGene:HORVU5Hr1G075110	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf
PANTHER:PTHR10288	PANTHER:PTHR10288:SF174	PFAM:PF00013	PFscan:PS50084	SEG:seg	SMART:SM00322
SUPFAM:SSF54791	UniParc:UPI000B474489	UniProt:A0A287RTV0	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr5H:-:546014965..546022533

Molecular Weight (calculated)

68351.6 Da

IEP (calculated)

7.450

GRAVY (calculated)

-0.335

Length

644 amino acids

Sequence
(BLAST)

001: PVFFVRISRV LAQPPHPMEI SPTSAPAGAA GAAAPATPAS SSNHPPPAKR PSITLRLLCP SSRAADLHPA RDLHVEHPPV GDEAVLVVSG PDAPAAAVRV
101: WERVVGHRVG GDEAGEGEEE KEVAGVVGCR MLAAGGQVGC VLGKGGKTVE RMRQESGAQI RVFRNREQVP PCALQGDELI HISGSFSAAR KALLLVSTCL
201: QDNPRPDTSN FPSGRPFGPP GSGVGCPPGV DPHSQRSYLP PPHVPDYHAR NFSSNGAAPG PRFFVEQEIV FRMICLNDMV GGVIGKGGST IRALQSETGA
301: SVKVIDPVAD SDERIIVISA RENSEMMRSP SQDALLRVYS KISEASMDKS SSVPARLLVP AQHIGCLLGK GGSIIAEMRK LTGASIRIFG NEQIPRCAQR
401: NDELVQVTGS FQSIQDALLH ITGRIRDLII PPKPHPSGGM PPYPPVGNPS HHQSRQEAPS HHSGGMPPYP MHPFRPNPPM GPFDVADPRP PGPPPSHPME
501: HMGADRMPYP YGCEQGGPRP FVEQPSPRTW APEAPATDAP RSMPDTVPAV DFRKGPVSSS ENQVATPATT TTEVVIPCKY IGFVCGTNGS DLDEIKKISG
601: AAITVHDPKP GDTNSTVIIC GDPEQTKKAQ SLIHAFIFCG LYQK

Best Arabidopsis Sequence Match ( AT1G51580.1 )
(BLAST)

001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S

Arabidopsis Description

At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.