Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G134700.1 | Wheat | cytosol | 93.9 | 64.17 |
| TraesCS1B01G155000.1 | Wheat | cytosol, mitochondrion, nucleus | 93.66 | 64.11 |
| TraesCS1A01G136600.1 | Wheat | cytosol, mitochondrion, nucleus | 93.66 | 64.11 |
| EER94248 | Sorghum | nucleus | 60.0 | 41.84 |
| Os10t0414700-01 | Rice | nucleus | 59.76 | 39.33 |
| Zm00001d014180_P004 | Maize | cytosol | 59.02 | 37.4 |
| Solyc06g084000.2.1 | Tomato | nucleus | 17.56 | 30.38 |
| Solyc01g097010.2.1 | Tomato | nucleus | 22.68 | 25.62 |
| KRH68752 | Soybean | cytoskeleton, cytosol, nucleus | 25.12 | 23.25 |
| KRG97000 | Soybean | nucleus | 24.88 | 22.87 |
| Bra001111.1-P | Field mustard | cytosol | 20.98 | 22.05 |
| VIT_07s0141g00800.t01 | Wine grape | cytosol | 21.71 | 20.55 |
| VIT_14s0081g00440.t01 | Wine grape | cytosol | 24.39 | 19.57 |
| Solyc09g066120.2.1 | Tomato | nucleus | 20.73 | 17.28 |
| PGSC0003DMT400051262 | Potato | nucleus | 20.73 | 16.93 |
| PGSC0003DMT400051668 | Potato | cytosol | 20.98 | 16.8 |
| HORVU4Hr1G011610.11 | Barley | cytoskeleton, cytosol, nucleus | 22.2 | 16.79 |
| KRH67322 | Soybean | nucleus | 21.46 | 16.64 |
| KRG95633 | Soybean | nucleus | 21.71 | 16.57 |
| HORVU1Hr1G055480.1 | Barley | plastid | 19.51 | 15.94 |
| KRH32136 | Soybean | cytosol | 21.71 | 15.75 |
| CDX74180 | Canola | cytosol | 20.98 | 15.28 |
| CDY40663 | Canola | cytosol | 20.98 | 15.28 |
| AT3G04610.2 | Thale cress | cytosol | 21.22 | 15.08 |
| KRH71306 | Soybean | nucleus | 18.05 | 14.95 |
| CDY64706 | Canola | nucleus | 12.68 | 12.87 |
| HORVU6Hr1G014510.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 13.9 | 11.52 |
| Zm00001d003290_P002 | Maize | mitochondrion | 5.61 | 10.04 |
| HORVU4Hr1G049680.1 | Barley | nucleus | 13.17 | 9.28 |
| HORVU5Hr1G121900.1 | Barley | nucleus | 12.68 | 8.23 |
| HORVU0Hr1G007380.3 | Barley | mitochondrion, nucleus | 12.2 | 7.91 |
| HORVU5Hr1G075110.3 | Barley | mitochondrion | 12.2 | 7.76 |
| Zm00001d010815_P001 | Maize | mitochondrion | 5.61 | 6.57 |
| HORVU3Hr1G057270.16 | Barley | plastid | 11.95 | 6.31 |
| HORVU7Hr1G082230.1 | Barley | nucleus | 9.51 | 6.23 |
| HORVU1Hr1G043680.7 | Barley | nucleus | 11.46 | 5.77 |
| Solyc06g084010.2.1 | Tomato | nucleus | 0.49 | 0.62 |
| HORVU1Hr1G036300.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G036280.1 | EnsemblPlantsGene:HORVU1Hr1G036280 | Gene3D:3.30.1370.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PANTHER:PTHR10288 |
| PANTHER:PTHR10288:SF152 | PFAM:PF00013 | PFscan:PS50084 | SMART:SM00322 | SUPFAM:SSF54791 | UniParc:UPI000B48959B |
| UniProt:A0A287F4S2 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:242961406..242964912
Molecular Weight (calculated)
45309.6 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.392
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: DCDLPPVALE EDRIVEIWGQ AARVRKALEL VASHLRKYLV DRSVIPLFDP HVPLSKLHAE MPPCHYSDHP EGMPPLYYSD HPEVPLEAVS PLCHSEDHQH
101: EPQWTETYYT RCRNPVEAPT SFGRYRSVTP PRHGISVYRQ ETSSPPMETY LSAPIELGSH HNLTAYEIRA TSPIGASATV ERIRSLISVH GHQAHPLRKT
201: CQSATIGKRP HLGISLYGSE SHTSRVSPSA AADLPTTRGM SEYELQASQS LSMYPPATVE NLLHYRVSAC GPEAPSHVLV RPLTSKSPAI TAQVTEKMQV
301: PIIYAEAVIG PTGARIDYIR RASRSSILIN DLEEDVMSIE INGSSATDVQ TAEQLIKNFM AEAAAASPGH KFDSIPPYLP APRSPQPDIL RTSYIEKESG
401: VAEQQLQTIY
101: EPQWTETYYT RCRNPVEAPT SFGRYRSVTP PRHGISVYRQ ETSSPPMETY LSAPIELGSH HNLTAYEIRA TSPIGASATV ERIRSLISVH GHQAHPLRKT
201: CQSATIGKRP HLGISLYGSE SHTSRVSPSA AADLPTTRGM SEYELQASQS LSMYPPATVE NLLHYRVSAC GPEAPSHVLV RPLTSKSPAI TAQVTEKMQV
301: PIIYAEAVIG PTGARIDYIR RASRSSILIN DLEEDVMSIE INGSSATDVQ TAEQLIKNFM AEAAAASPGH KFDSIPPYLP APRSPQPDIL RTSYIEKESG
401: VAEQQLQTIY
001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY
Arabidopsis Description
FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.