Factsheet for Solyc09g066120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400051262	Potato	nucleus	94.11	92.23
Solyc06g084000.2.1	Tomato	nucleus	36.38	75.53
VIT_07s0141g00800.t01	Wine grape	cytosol	52.85	60.05
GSMUA_Achr7P01590_001	Banana	nucleus	50.61	56.59
Solyc01g097010.2.1	Tomato	nucleus	40.04	54.27
KRH71306	Soybean	nucleus	53.25	52.93
GSMUA_Achr5P03200_001	Banana	cytosol	28.46	52.83
KRH67322	Soybean	nucleus	56.71	52.74
KRG95633	Soybean	nucleus	57.32	52.51
KRH32136	Soybean	cytosol	58.13	50.62
TraesCS4B01G069700.1	Wheat	nucleus	48.78	46.97
Os03t0627500-01	Rice	cytosol	48.37	46.67
TraesCS4D01G068400.1	Wheat	nucleus	48.58	46.5
TraesCS4A01G245800.1	Wheat	nucleus	48.37	45.33
TraesCS5D01G071000.1	Wheat	nucleus	47.76	45.28
TraesCS5B01G066800.1	Wheat	nucleus	47.76	45.19
EES16283	Sorghum	cytosol	46.54	44.99
TraesCS5A01G059500.1	Wheat	cytosol	47.36	44.81
Zm00001d030968_P006	Maize	extracellular	45.94	44.49
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	47.15	42.8
Solyc06g084010.2.1	Tomato	nucleus	27.03	41.18
OQU91315	Sorghum	plastid	39.02	39.51
Solyc05g041740.1.1	Tomato	plastid	16.06	37.62
Solyc07g008490.2.1	Tomato	nucleus	34.96	35.68
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	46.54	34.86
HORVU1Hr1G036300.1	Barley	cytosol	12.6	34.07
Solyc08g074330.1.1	Tomato	plastid	14.02	30.4
Os12t0597600-01	Rice	cytosol	9.96	29.52
Solyc05g043210.1.1	Tomato	plastid	15.04	29.25
Zm00001d003290_P002	Maize	mitochondrion	12.2	26.2
EER94248	Sorghum	nucleus	30.69	25.68
Solyc05g042180.1.1	Tomato	plastid	14.23	25.64
TraesCS1D01G134700.1	Wheat	cytosol	30.28	24.83
TraesCS1A01G136600.1	Wheat	cytosol, mitochondrion, nucleus	30.08	24.71
TraesCS1B01G155000.1	Wheat	cytosol, mitochondrion, nucleus	30.08	24.71
Os10t0414700-01	Rice	nucleus	30.28	23.92
Solyc05g043200.1.1	Tomato	nucleus, peroxisome, plastid	15.45	23.75
Zm00001d014180_P004	Maize	cytosol	30.89	23.49
HORVU1Hr1G036280.1	Barley	cytosol	17.28	20.73
Solyc12g055790.1.1	Tomato	nucleus	10.37	20.48
Solyc01g090480.2.1	Tomato	nucleus	18.09	20.05
Zm00001d010815_P001	Maize	mitochondrion	13.62	19.14
Solyc05g007810.2.1	Tomato	nucleus	20.53	18.98
Solyc02g088120.2.1	Tomato	nucleus	16.67	15.62
Solyc02g067210.2.1	Tomato	nucleus	19.31	15.42
Solyc08g048500.2.1	Tomato	nucleus	19.11	15.23
Solyc04g077060.2.1	Tomato	nucleus	13.62	14.16
Solyc03g034200.2.1	Tomato	nucleus	19.92	13.86
Solyc01g106020.2.1	Tomato	plastid	16.46	12.54
Solyc11g010840.1.1	Tomato	plastid	14.84	11.91
Solyc03g082980.2.1	Tomato	nucleus	15.65	11.53
Solyc12g055780.1.1	Tomato	cytosol, nucleus	6.3	8.38

Protein Annotations

EnsemblPlants:Solyc09g066120.2.1	EnsemblPlantsGene:Solyc09g066120.2	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf
PANTHER:PTHR10288	PANTHER:PTHR10288:SF155	PFAM:PF00013	PFscan:PS50084	SEG:seg	SMART:SM00322
SUPFAM:SSF54791	UniParc:UPI000276CB4E	UniProt:K4CUN7	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr9:+:64520600..64528534

Molecular Weight (calculated)

52587.4 Da

IEP (calculated)

5.504

GRAVY (calculated)

-0.548

Length

492 amino acids

Sequence
(BLAST)

001: MGNLHDTENL DNMNNVQDND NVNGKDNVHD ANHVHDADHV HDADDVHNMN NIHDSEAIPA LINAPEETHH SEEDKVTPTD AVAGEEKKWP GWPGQNVFRM
101: LVPIQKVGGV IGRKGEYIKK TCEETKARIK VLDGPPGTTE RAVMISAKEE PSLLIPPAMD GLLKVHKQIV DVDSDSANAP SGAGRSVTTR LLVAASQAGN
201: LIGKQGSTIK SIQDTSQCTI RVVGQEHLPL FALPDDNVVE IQGEPAGVHK AVEMVASHLR KFLVDHSVVG FFEMQMQMPN ARSNQNRAPA GPTQSWGPPP
301: SSFPGSAEGG FGFGPNTQYM PPARQFDNYF PPVDMAPLEK KPRQGPSPYS RDASMGTYGT NAQTQQSMVT KVTQNMQIPL SYADAVIGTS GSNISYIRRA
401: SGASIAIQET RDVPGEMTVE ITGSASQVQT AQQLIQNSVA DAASSMHNTA AGPPSQGYNP HSQGPLYPSL SGGPGHPSGA DYGSMYGSSY GY

Best Arabidopsis Sequence Match ( AT3G04610.4 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVDD QLEYHQYQLQ DQANEDVQDH SQDDLQYQPQ NQEQFQLQDE
101: AHDQAQYQAQ GDVQDHNGDE VQDKVEDEEG IPEHLESLQK SEPEEDATVG GEEKRWPGWP GETVFRMLVP AQKVGSIIGR KGDVIKKIVE ETRARIKILD
201: GPPGTTERAV MVSGKEEPES SLPPSMDGLL RVHMRIVDGL DGEASQAPPP SKVSTRLLVP ASQAGSLIGK QGGTVKAIQE ASACIVRVLG SEDLPVFALQ
301: DDRVVEVVGE PTSVHRALEL IASHLRKFLV DRSIIPFFEN QMQKPTRQMD HMPPPHQSWG PPQGHAPSVG GGGYGHNPPP YMQPPPRHDS YYPPPEMRQP
401: PMEKQPHQGI SAYGREPPMN VHVSSAPPMV AQQVTQQMQI PLSYADAVIG TSGSNISYTR RLSGATVTIQ ETRGVPGEMT VEVSGTGSQV QTAVQLIQNF
501: MAEAGAPAPA QPQTVAPEQQ GYNPYATHGS VYAAAPTNPP GGYATDYSSG YGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.