Factsheet for VIT_07s0141g00800.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g084000.2.1	Tomato	nucleus	32.1	58.65
GSMUA_Achr7P01590_001	Banana	nucleus	56.81	55.91
PGSC0003DMT400051668	Potato	cytosol	63.05	53.32
VIT_14s0081g00440.t01	Wine grape	cytosol	62.59	53.03
Solyc09g066120.2.1	Tomato	nucleus	60.05	52.85
PGSC0003DMT400051262	Potato	nucleus	61.2	52.79
KRH67322	Soybean	nucleus	62.36	51.04
KRG95633	Soybean	nucleus	62.82	50.65
GSMUA_Achr5P03200_001	Banana	cytosol	30.95	50.57
KRH71306	Soybean	nucleus	55.66	48.69
KRH32136	Soybean	cytosol	62.36	47.79
Os03t0627500-01	Rice	cytosol	54.97	46.67
TraesCS4B01G069700.1	Wheat	nucleus	52.89	44.81
TraesCS4D01G068400.1	Wheat	nucleus	52.66	44.36
TraesCS5D01G071000.1	Wheat	nucleus	53.12	44.32
Zm00001d030968_P006	Maize	extracellular	51.96	44.29
TraesCS5B01G066800.1	Wheat	nucleus	53.12	44.23
TraesCS5A01G059500.1	Wheat	cytosol	52.89	44.04
TraesCS4A01G245800.1	Wheat	nucleus	52.66	43.43
EES16283	Sorghum	cytosol	51.04	43.42
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	52.19	41.7
OQU91315	Sorghum	plastid	44.11	39.3
HORVU1Hr1G036300.1	Barley	cytosol	15.94	37.91
VIT_11s0052g00030.t01	Wine grape	plastid	39.72	36.91
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	52.19	34.4
Solyc06g084010.2.1	Tomato	nucleus	25.64	34.37
Os12t0597600-01	Rice	cytosol	11.32	29.52
Zm00001d003290_P002	Maize	mitochondrion	15.01	28.38
EER94248	Sorghum	nucleus	36.49	26.87
TraesCS1A01G136600.1	Wheat	cytosol, mitochondrion, nucleus	36.49	26.38
TraesCS1B01G155000.1	Wheat	cytosol, mitochondrion, nucleus	36.26	26.21
TraesCS1D01G134700.1	Wheat	cytosol	36.26	26.17
VIT_09s0002g00070.t01	Wine grape	mitochondrion	7.39	25.0
Zm00001d014180_P004	Maize	cytosol	36.72	24.57
VIT_15s0021g01940.t01	Wine grape	nucleus	19.4	24.28
Os10t0414700-01	Rice	nucleus	34.64	24.08
VIT_09s0002g00030.t01	Wine grape	cytosol, nucleus, plastid	12.93	23.73
HORVU1Hr1G036280.1	Barley	cytosol	20.55	21.71
VIT_14s0108g01040.t01	Wine grape	nucleus	25.87	20.44
Zm00001d010815_P001	Maize	mitochondrion	16.17	20.0
VIT_14s0006g00030.t01	Wine grape	cytosol	12.24	18.73
VIT_01s0026g02650.t01	Wine grape	nucleus	24.25	18.36
VIT_14s0006g02960.t01	Wine grape	nucleus, plastid	23.56	15.09
VIT_10s0003g03860.t01	Wine grape	cytosol, nucleus, plastid	19.86	13.8
VIT_03s0038g00420.t01	Wine grape	plastid	20.32	13.58
VIT_18s0001g08280.t01	Wine grape	cytosol	19.63	12.13
VIT_16s0098g01660.t01	Wine grape	nucleus	18.01	11.8
VIT_09s0054g00450.t01	Wine grape	plastid	18.24	11.22

Protein Annotations

EntrezGene:100266515	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	EMBL:AM480719	ProteinID:CAN73004
ProteinID:CAN73004.1	ProteinID:CBI17956	ProteinID:CBI17956.3	UniProt:D7SQM5	EMBL:FN594965	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	PFAM:PF00013	PFscan:PS50084
PANTHER:PTHR10288	PANTHER:PTHR10288:SF155	SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI0001BE12D2	ArrayExpress:VIT_07s0141g00800
EnsemblPlantsGene:VIT_07s0141g00800	EnsemblPlants:VIT_07s0141g00800.t01	RefSeq:XP_010651947.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:461592..479561

Molecular Weight (calculated)

46106.6 Da

IEP (calculated)

5.243

GRAVY (calculated)

-0.311

Length

433 amino acids

Sequence
(BLAST)

001: MAGENVDELD EGGNCHPPEK QGLNDGSGGG EKWPGWPGEN VFRMLIPVQK VGYIIGRKGE HIKKLSEETK ARIKILDGPP GTSERAVMVS AKEEPDAPIA
101: PAIDGLLRVH KCIMDVESDV PSAAGVMVST RLLVVAAQAG SLIGKQGATI KSIQEASNCI VRVLGENLPL FALQNDTVVE IQGEPASVHK AVELIASNLR
201: KFLVDRSVIK VFEMEMQKPN TQGNENMPPQ QSWDPSQVFP INTGGEPGFV PNLQYMQPPY QLDNYYPPPA QTPLDQHHHH QGPPYGRETG AGVSSPSLTP
301: QQSIVNKITQ YMQVPLSYAD AVIGASGVNI SYVRRTSGAT IAIEETKGVP GEMTVEINGS VSQVQTAQQL IQNFMAEAAS STLNLAGGAI SQGYNPFPTH
401: GAVSTSQPSN VIEHLGPSAG GSYGSVYGSH SGY

Best Arabidopsis Sequence Match ( AT3G04610.1 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.