Factsheet for VIT_14s0081g00440.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	66.73	76.98
KRG97000	Soybean	nucleus	66.73	76.46
Bra001111.1-P	Field mustard	cytosol	56.36	73.85
Solyc01g097010.2.1	Tomato	nucleus	52.05	73.28
GSMUA_Achr7P01590_001	Banana	nucleus	57.34	66.59
GSMUA_Achr5P03200_001	Banana	cytosol	33.27	64.15
VIT_07s0141g00800.t01	Wine grape	cytosol	53.03	62.59
CDY64706	Canola	nucleus	44.81	56.68
CDX74180	Canola	cytosol	61.45	55.77
CDY40663	Canola	cytosol	61.25	55.59
AT3G04610.2	Thale cress	cytosol	62.43	55.29
Os03t0627500-01	Rice	cytosol	53.23	53.33
TraesCS4B01G069700.1	Wheat	nucleus	53.03	53.03
TraesCS4D01G068400.1	Wheat	nucleus	52.84	52.53
EES16283	Sorghum	cytosol	50.68	50.88
TraesCS4A01G245800.1	Wheat	nucleus	52.05	50.67
Zm00001d030968_P006	Maize	extracellular	49.9	50.2
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	52.84	49.82
TraesCS5D01G071000.1	Wheat	nucleus	50.1	49.33
TraesCS5B01G066800.1	Wheat	nucleus	50.1	49.23
TraesCS5A01G059500.1	Wheat	cytosol	49.9	49.04
OQU91315	Sorghum	plastid	44.23	46.5
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	54.21	42.16
HORVU1Hr1G036300.1	Barley	cytosol	14.29	40.11
VIT_11s0052g00030.t01	Wine grape	plastid	36.01	39.48
Os12t0597600-01	Rice	cytosol	10.37	31.93
EER94248	Sorghum	nucleus	34.83	30.27
Zm00001d003290_P002	Maize	mitochondrion	13.31	29.69
TraesCS1B01G155000.1	Wheat	cytosol, mitochondrion, nucleus	33.66	28.71
TraesCS1D01G134700.1	Wheat	cytosol	33.66	28.67
TraesCS1A01G136600.1	Wheat	cytosol, mitochondrion, nucleus	33.46	28.55
Zm00001d014180_P004	Maize	cytosol	34.25	27.05
Os10t0414700-01	Rice	nucleus	32.49	26.65
VIT_09s0002g00070.t01	Wine grape	mitochondrion	6.46	25.78
HORVU1Hr1G036280.1	Barley	cytosol	19.57	24.39
VIT_15s0021g01940.t01	Wine grape	nucleus	16.05	23.7
VIT_09s0002g00030.t01	Wine grape	cytosol, nucleus, plastid	10.76	23.31
VIT_14s0108g01040.t01	Wine grape	nucleus	22.31	20.8
Zm00001d010815_P001	Maize	mitochondrion	14.09	20.57
VIT_01s0026g02650.t01	Wine grape	nucleus	21.53	19.23
VIT_14s0006g00030.t01	Wine grape	cytosol	9.78	17.67
VIT_10s0003g03860.t01	Wine grape	cytosol, nucleus, plastid	19.37	15.89
VIT_14s0006g02960.t01	Wine grape	nucleus, plastid	20.74	15.68
VIT_03s0038g00420.t01	Wine grape	plastid	18.2	14.35
VIT_18s0001g08280.t01	Wine grape	cytosol	18.59	13.55
VIT_16s0098g01660.t01	Wine grape	nucleus	16.24	12.56
VIT_09s0054g00450.t01	Wine grape	plastid	17.22	12.5

Protein Annotations

EntrezGene:100242733	wikigene:100242733	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	ProteinID:CBI35182
ProteinID:CBI35182.3	UniProt:D7TXC7	EMBL:FN596256	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009908	GO:GO:0009911
InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	EntrezGene:LOC100242733	wikigene:LOC100242733
PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF224	SMART:SM00322	SUPFAM:SSF54791
TIGR:TC58884	TIGR:TC62231	TIGR:TC65535	UniParc:UPI0001BE4365	ArrayExpress:VIT_14s0081g00440	EnsemblPlantsGene:VIT_14s0081g00440
EnsemblPlants:VIT_14s0081g00440.t01	unigene:Vvi.7336	RefSeq:XP_002269249	RefSeq:XP_002269249.1	SEG:seg	:

Description

No Description!

Coordinates

chr14:-:8305433..8321747

Molecular Weight (calculated)

54877.4 Da

IEP (calculated)

6.158

GRAVY (calculated)

-0.336

Length

511 amino acids

Sequence
(BLAST)

001: MIAKEILFGR KISKIENDRD IYNHKHKQNR WSALELCPEN LAHSPSLILP FAALLFWYCF FSSILDTAVM AEVEENFGEP DMDQLPEDSQ PQQKRGRDDD
101: SAIGGGEKRW PGWPGESVFR MLVPAQKVGS IIGRKGEFIK KIVEETRARI KILDGPPGTA ERAVMVSAKE EPDSSLPPAM DGLLKVHKRI VDGLEGDSSH
201: MPPGGKVSTR LLVAASQAGS LIGKQGGTVK SIQEASNCIV RVLGAEDLPI FALQDDRVVE VVGEPIGVHK AVELIASHLR KFLVDRSVIP LFEMQMQMSN
301: PPIEHMPPHQ PWGPPQGLPP NASGGPGFGP NPPYMPPPRQ LDSYYPPPEL PPPVEKQPHQ GISAYGREVP MGGHAPSSAQ PAPSMITQVT QQMQIPLSYA
401: DAVIGTAGAS ISYIRRASGA TVTIQETRGV PGEMTVEING TASQVQAAQQ LIQNFMAEAA APAQAQAGGS ADQGYNSYAA HGSMYASPAS NPAHASHTGG
501: YGPVYGANYG Y

Best Arabidopsis Sequence Match ( AT3G04610.4 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVDD QLEYHQYQLQ DQANEDVQDH SQDDLQYQPQ NQEQFQLQDE
101: AHDQAQYQAQ GDVQDHNGDE VQDKVEDEEG IPEHLESLQK SEPEEDATVG GEEKRWPGWP GETVFRMLVP AQKVGSIIGR KGDVIKKIVE ETRARIKILD
201: GPPGTTERAV MVSGKEEPES SLPPSMDGLL RVHMRIVDGL DGEASQAPPP SKVSTRLLVP ASQAGSLIGK QGGTVKAIQE ASACIVRVLG SEDLPVFALQ
301: DDRVVEVVGE PTSVHRALEL IASHLRKFLV DRSIIPFFEN QMQKPTRQMD HMPPPHQSWG PPQGHAPSVG GGGYGHNPPP YMQPPPRHDS YYPPPEMRQP
401: PMEKQPHQGI SAYGREPPMN VHVSSAPPMV AQQVTQQMQI PLSYADAVIG TSGSNISYTR RLSGATVTIQ ETRGVPGEMT VEVSGTGSQV QTAVQLIQNF
501: MAEAGAPAPA QPQTVAPEQQ GYNPYATHGS VYAAAPTNPP GGYATDYSSG YGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.