Factsheet for Os03t0627500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G069700.1	Wheat	nucleus	79.41	79.26
TraesCS4D01G068400.1	Wheat	nucleus	78.63	78.02
TraesCS4A01G245800.1	Wheat	nucleus	78.82	76.57
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	77.45	72.88
GSMUA_Achr7P01590_001	Banana	nucleus	57.06	66.14
OQU91315	Sorghum	plastid	60.39	63.37
GSMUA_Achr5P03200_001	Banana	cytosol	32.16	61.89
Bra001111.1-P	Field mustard	cytosol	45.1	58.97
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	75.29	58.45
Solyc01g097010.2.1	Tomato	nucleus	40.98	57.58
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	49.61	57.11
KRG97000	Soybean	nucleus	49.8	56.95
VIT_07s0141g00800.t01	Wine grape	cytosol	46.67	54.97
Solyc06g084000.2.1	Tomato	nucleus	25.1	54.01
VIT_14s0081g00440.t01	Wine grape	cytosol	53.33	53.23
Os12t0597600-01	Rice	cytosol	16.08	49.4
PGSC0003DMT400051668	Potato	cytosol	49.02	48.83
Solyc09g066120.2.1	Tomato	nucleus	46.67	48.37
PGSC0003DMT400051262	Potato	nucleus	47.25	48.01
CDY64706	Canola	nucleus	36.47	46.04
KRH71306	Soybean	nucleus	44.12	45.45
CDX74180	Canola	cytosol	50.0	45.29
CDY40663	Canola	cytosol	49.8	45.12
KRH67322	Soybean	nucleus	46.27	44.61
AT3G04610.2	Thale cress	cytosol	50.39	44.54
KRG95633	Soybean	nucleus	46.86	44.51
KRH32136	Soybean	cytosol	47.45	42.83
Os10t0564000-01	Rice	cytosol	33.33	37.12
Solyc06g084010.2.1	Tomato	nucleus	20.78	32.82
Os02t0125500-00	Rice	cytosol	27.45	31.89
Os10t0414700-01	Rice	nucleus	30.78	25.2
Os03t0376800-02	Rice	nucleus	21.96	20.66
Os06t0342500-01	Rice	cytosol	18.04	13.9
Os01t0235800-01	Rice	cytosol	12.16	13.25
Os09t0498600-01	Rice	plastid	15.29	12.66
Os10t0495000-01	Rice	nucleus	17.84	11.94
Os07t0439100-01	Rice	cytosol	2.55	5.58
Os08t0200300-02	Rice	plastid	0.39	1.54

Protein Annotations

Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	EntrezGene:4333505	ProteinID:AAL31692.1	ProteinID:ABF97724.1
EMBL:AK067707	ProteinID:BAS85356.1	ProteinID:EEE59537.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	EnsemblPlantsGene:Os03g0627500
EnsemblPlants:Os03t0627500-01	PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF155	UniProt:Q10GH8
SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI00000A19BA	RefSeq:XP_015632519.1	SEG:seg	:

Description

Similar to KH domain containing protein, expressed. (Os03t0627500-01)

Coordinates

chr3:+:23925619..23934166

Molecular Weight (calculated)

54822.9 Da

IEP (calculated)

4.549

GRAVY (calculated)

-0.624

Length

510 amino acids

Sequence
(BLAST)

001: MDGLVENFDA DDLGEMPQNH YNEEQLIPYS DVSHPYNEEP DNMDNVEEGN PYIQQVSLYS EEPENQYNEE PSNPYQEESD NAYNGEVKQQ DSLPVEADKK
101: WPGWPGESVF RILIPAQKVG AIIGRKGEFI KKMCEESKAR IKILDGPPGV PERTVMISAK DEPDAPISPA MDGLFRVYKR ITDGSDGDSG QPERNISNVG
201: PTRLLVPASQ AGSLIGKQGA TIKSIQDSSK SIVRIVETLP LVALNDDRVV EIQGEPVGVQ KALESIASHL RKFLVDRSVL PLFEGQMKMH NAQREQAMAA
301: PQPWGPPQPW GPPPSHLPPG GPGYGGHPQF MPPRPQDNYY PPPDVPSMEK QPHYGISAYG REAPTGVSAS GNQPPSHVAS QVTHNMQIPL SYADAVIGAA
401: GASISYIRRH SGATVTIQES RGAPGEMTVE IIGSASQVQT AQQLVQNFMA EAPQGPPPPA SNPPAPAVDL SYGSYPPPYG ASYGSAASGA GPAPHNGGSY
501: GGTTYPSYGY

Best Arabidopsis Sequence Match ( AT3G04610.1 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.