CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71306	Soybean	nucleus	80.53	91.92
KRH67322	Soybean	nucleus	73.98	79.02
KRG95633	Soybean	nucleus	74.51	78.4
Solyc06g084000.2.1	Tomato	nucleus	27.26	64.98
VIT_07s0141g00800.t01	Wine grape	cytosol	47.79	62.36
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	46.02	58.69
KRG97000	Soybean	nucleus	46.02	58.3
Solyc09g066120.2.1	Tomato	nucleus	50.62	58.13
PGSC0003DMT400051262	Potato	nucleus	50.97	57.37
PGSC0003DMT400051668	Potato	cytosol	51.68	57.03
GSMUA_Achr7P01590_001	Banana	nucleus	43.89	56.36
GSMUA_Achr5P03200_001	Banana	cytosol	24.96	53.21
Os03t0627500-01	Rice	cytosol	42.83	47.45
TraesCS4B01G069700.1	Wheat	nucleus	42.12	46.58
TraesCS4D01G068400.1	Wheat	nucleus	41.95	46.11
EES16283	Sorghum	cytosol	41.06	45.58
TraesCS5B01G066800.1	Wheat	nucleus	41.95	45.58
TraesCS5D01G071000.1	Wheat	nucleus	41.77	45.47
TraesCS5A01G059500.1	Wheat	cytosol	41.59	45.19
Zm00001d030968_P006	Maize	extracellular	40.35	44.88
TraesCS4A01G245800.1	Wheat	nucleus	41.59	44.76
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	42.12	43.91
OQU91315	Sorghum	plastid	34.69	40.33
KRH19104	Soybean	nucleus	30.09	38.99
KRH02776	Soybean	nucleus	29.91	38.76
HORVU1Hr1G036300.1	Barley	cytosol	12.04	37.36
KRH12329	Soybean	cytosol, nucleus	29.03	37.1
KRH37335	Soybean	cytosol, nucleus	28.67	36.57
Zm00001d013712_P003	Maize	cytosol, plastid, vacuole	42.12	36.23
Solyc06g084010.2.1	Tomato	nucleus	20.71	36.22
Os12t0597600-01	Rice	cytosol	9.91	33.73
KRH58152	Soybean	cytosol	7.08	31.5
Zm00001d003290_P002	Maize	mitochondrion	10.97	27.07
EER94248	Sorghum	nucleus	27.79	26.7
TraesCS1A01G136600.1	Wheat	cytosol, mitochondrion, nucleus	27.96	26.38
TraesCS1B01G155000.1	Wheat	cytosol, mitochondrion, nucleus	27.79	26.21
TraesCS1D01G134700.1	Wheat	cytosol	27.61	26.0
Zm00001d014180_P004	Maize	cytosol	27.79	24.27
Os10t0414700-01	Rice	nucleus	26.55	24.08
KRH00973	Soybean	nucleus, plastid	14.51	22.65
HORVU1Hr1G036280.1	Barley	cytosol	15.75	21.71
KRH40252	Soybean	cytosol, golgi, nucleus, plastid	14.87	21.65
KRH01196	Soybean	nucleus	19.29	20.07
KRH40065	Soybean	nucleus	19.11	20.0
KRG93559	Soybean	nucleus	18.76	19.34
KRH18467	Soybean	nucleus	18.41	18.98
Zm00001d010815_P001	Maize	mitochondrion	11.68	18.86
KRH58669	Soybean	endoplasmic reticulum, nucleus	16.99	15.46
KRH49838	Soybean	plastid	15.58	14.92
KRH42565	Soybean	nucleus	16.46	14.88
KRH42077	Soybean	plastid	15.22	14.65
KRH62129	Soybean	plastid	16.11	13.42
KRH52837	Soybean	plastid	15.04	12.57
KRH21739	Soybean	plastid	15.75	12.45
KRH64403	Soybean	nucleus	14.16	12.42
KRH53532	Soybean	nucleus	14.16	12.36
KRH39475	Soybean	plastid	12.92	11.95
KRH44614	Soybean	mitochondrion, nucleus	11.86	11.86
KRH74462	Soybean	nucleus	12.74	11.69
KRH47290	Soybean	mitochondrion, nucleus	11.5	11.63
KRH10613	Soybean	plastid	14.16	11.0

Protein Annotations

EntrezGene:100818363	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	EMBL:ACUP02006095	ncoils:Coil
EnsemblPlantsGene:GLYMA_10G033900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	UniProt:I1L8B2
InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	EnsemblPlants:KRH32136	ProteinID:KRH32136
ProteinID:KRH32136.1	ProteinID:KRH32137.1	PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF155
SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI00023C8F25	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:2919412..2925687

Molecular Weight (calculated)

60233.7 Da

IEP (calculated)

4.516

GRAVY (calculated)

-0.573

Length

565 amino acids

Sequence
(BLAST)

001: MSGEVFDGQD AGYVPENPEF PQNHSDEYDG GNVIDDSGFP QLQPDEHDNG GFPQLQPDEY DAGGFPQLQP DEHDAGGFLQ LQPDEHNAGN LAEDGNIPEH
101: NFDGNDVEGL PGNPDLPSQE HAEEQNIGGD VTENFGSEEK RGPEEDLKGG EVKKWPGWPG ENVFRMLVPV QKVGSIIGRK GEFIRKITED TKARIKILDG
201: PPGTSERAVM VSAKEEPDCS IPPAVDGLLR VHKQVVNVDP HPADSASGAV RPVVTRLLVA DTQAGSLIGK QGSTIKSFQD ATGCNIRILG SEHLPVFALR
301: DDSIVEIQGE SSGVHKAVEL VAIHLRKFLV DRSIVGVFET QMQRPDVRAN QNVPPGPPHQ PWGPPQGFPA PGPGSGGGPA FPPNTQYMPP SHNYDNYYPP
401: ADLSPMDKHL HQGPPPAYVR DVSMGIHSSS AQAQQSVVTK VTQHMQIPLS YADAVIGASG ANISYIRRAS GASITIQETR GVPGEMTVEI SGTASQIQAA
501: QQLVQNFMAE AASAAQDHMG GSINQGYNSY PTNPVYASPP SSAAGHAGHA PSADYGSVYG TNYGY

Best Arabidopsis Sequence Match ( AT3G04610.1 )
(BLAST)

001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVPD PTLEPQQYEV PDQTLEPQQY EVDDQLEYHQ YQLQDQANED
101: VQDHSQDDLQ YQPQNQEQFQ LQDEAHDQAQ YQAQGDVQDH NGDEVQDKVE DEEGIPEHLE SLQKSEPEED ATVGGEEKRW PGWPGETVFR MLVPAQKVGS
201: IIGRKGDVIK KIVEETRARI KILDGPPGTT ERAVMVSGKE EPESSLPPSM DGLLRVHMRI VDGLDGEASQ APPPSKVSTR LLVPASQAGS LIGKQGGTVK
301: AIQEASACIV RVLGSEDLPV FALQDDRVVE VVGEPTSVHR ALELIASHLR KFLVDRSIIP FFENQMQKPT RQMDHMPPPH QSWGPPQGHA PSVGGGGYGH
401: NPPPYMQPPP RHDSYYPPPE MRQPPMEKQP HQGISAYGRE PPMNVHVSSA PPMVAQQVTQ QMQIPLSYAD AVIGTSGSNI SYTRRLSGAT VTIQETRGVP
501: GEMTVEVSGT GSQVQTAVQL IQNFMAEAGA PAPAQPQTVA PEQQGYNPYA THGSVYAAAP TNPPGGYATD YSSGYGY

Arabidopsis Description

FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.