Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0002g00030.t01 | Wine grape | cytosol, nucleus, plastid | 40.94 | 22.03 |
| KRH40065 | Soybean | nucleus | 83.46 | 19.63 |
| KRH01196 | Soybean | nucleus | 81.89 | 19.15 |
| VIT_14s0006g00030.t01 | Wine grape | cytosol | 42.52 | 19.08 |
| Bra008709.1-P | Field mustard | nucleus | 59.06 | 14.51 |
| AT5G15270.2 | Thale cress | nucleus | 62.2 | 14.42 |
| CDX69536 | Canola | nucleus | 59.06 | 14.1 |
| CDY60930 | Canola | nucleus | 58.27 | 13.91 |
| CDX70604 | Canola | nucleus | 61.42 | 13.45 |
| PGSC0003DMT400064701 | Potato | nucleus | 58.27 | 13.33 |
| VIT_14s0108g01040.t01 | Wine grape | nucleus | 57.48 | 13.32 |
| KRG93559 | Soybean | nucleus | 56.69 | 13.14 |
| CDX78623 | Canola | nucleus | 61.42 | 13.0 |
| KRH18467 | Soybean | nucleus | 55.91 | 12.96 |
| Bra006294.1-P | Field mustard | nucleus | 60.63 | 12.83 |
| PGSC0003DMT400003371 | Potato | nucleus | 53.54 | 12.57 |
| Solyc02g067210.2.1 | Tomato | nucleus | 56.69 | 11.69 |
| Solyc02g088120.2.1 | Tomato | nucleus | 44.09 | 10.67 |
| VIT_09s0002g00070.t01 | Wine grape | mitochondrion | 10.24 | 10.16 |
| KRH00973 | Soybean | nucleus, plastid | 26.77 | 9.39 |
| KRH40252 | Soybean | cytosol, golgi, nucleus, plastid | 26.77 | 8.76 |
| KRG97000 | Soybean | nucleus | 30.71 | 8.74 |
| KRH68752 | Soybean | cytoskeleton, cytosol, nucleus | 29.92 | 8.58 |
| KRH19104 | Soybean | nucleus | 29.13 | 8.49 |
| KRH02776 | Soybean | nucleus | 28.35 | 8.26 |
| KRH67322 | Soybean | nucleus | 33.07 | 7.94 |
| KRH71306 | Soybean | nucleus | 30.71 | 7.88 |
| KRG95633 | Soybean | nucleus | 33.07 | 7.82 |
| KRH12329 | Soybean | cytosol, nucleus | 26.77 | 7.69 |
| KRH37335 | Soybean | cytosol, nucleus | 26.77 | 7.67 |
| KRH32136 | Soybean | cytosol | 31.5 | 7.08 |
| KRH58669 | Soybean | endoplasmic reticulum, nucleus | 30.71 | 6.28 |
| KRH74462 | Soybean | nucleus | 29.92 | 6.17 |
| KRH39475 | Soybean | plastid | 29.13 | 6.06 |
| KRH42565 | Soybean | nucleus | 29.13 | 5.92 |
| KRH47290 | Soybean | mitochondrion, nucleus | 25.98 | 5.9 |
| KRH62129 | Soybean | plastid | 31.5 | 5.9 |
| KRH44614 | Soybean | mitochondrion, nucleus | 25.98 | 5.84 |
| KRH42077 | Soybean | plastid | 26.77 | 5.79 |
| KRH52837 | Soybean | plastid | 29.92 | 5.62 |
| KRH49838 | Soybean | plastid | 25.98 | 5.59 |
| KRH64403 | Soybean | nucleus | 26.77 | 5.28 |
| KRH53532 | Soybean | nucleus | 26.77 | 5.26 |
| KRH21739 | Soybean | plastid | 28.35 | 5.03 |
| KRH10613 | Soybean | plastid | 27.56 | 4.81 |
Protein Annotations
| EMBL:ACUP02003205 | EnsemblPlants:KRH58152 | EnsemblPlantsGene:GLYMA_05G107900 | Gene3D:3.30.310.210 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf |
| PANTHER:PTHR10288 | PANTHER:PTHR10288:SF151 | PFAM:PF00013 | PFscan:PS50084 | ProteinID:KRH58152 | ProteinID:KRH58152.1 |
| SMART:SM00322 | SUPFAM:SSF54791 | UniParc:UPI00029687B8 | UniProt:K7KPI8 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr5:-:28607580..28607963
Molecular Weight (calculated)
14039.5 Da
IEP (calculated)
4.681
GRAVY (calculated)
-0.324
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MNESSSSLIT ADDTVFRYLC PVRKIGSVIS RGGDIVKQLR TDTKAKIHID DALLGCDKCV ATIHSSSEEI NHFDEIDDLV SLAQDELFRV HQRVIAKDAR
101: EDEDEEHVTA KLLVPSDQIG YVNAKGG
101: EDEDEEHVTA KLLVPSDQIG YVNAKGG
001: MSPDHRMSPD HRDSHRKRSR PQSDYDDNGG SKRRYRGDDR DSLVIDRDDT VFRYLCPVKK IGSVIGRGGD IVKQLRNDTR SKIRIGEAIP GCDERVITIY
101: SPSDETNAFG DGEKVLSPAQ DALFRIHDRV VADDARSEDS PEGEKQVTAK LLVPSDQIGC ILGRGGQIVQ NIRSETGAQI RIVKDRNMPL CALNSDELIQ
201: ISGEVLIVKK ALLQIASRLH ENPSRSQNLL SSSGGYPAGS LMSHAGGPRL VGLAPLMGSY GRDAGDWSRP LYQPPRNDPP ATEFFIRLVS PVENIASVIG
301: KGGALINQLR QETRATIKVD SSRTEGNDCL ITISAREVFE DAYSPTIEAV MRLQPKCSDK VERDSGLVSF TTRLLVPSSR IGCILGKGGA IITEMRRMTK
401: ANIRILGKEN LPKVASDDDE MVQISGELDV AKEALIQITS RLRANVFDRE GAVSALMPVL PYVPVAPDAG DRFDYDSRDS RRLERGNPYP GGYGSSGVSA
501: EGYSPYGAPV GGSSSTPYGV YGGYASGRSS SSG
101: SPSDETNAFG DGEKVLSPAQ DALFRIHDRV VADDARSEDS PEGEKQVTAK LLVPSDQIGC ILGRGGQIVQ NIRSETGAQI RIVKDRNMPL CALNSDELIQ
201: ISGEVLIVKK ALLQIASRLH ENPSRSQNLL SSSGGYPAGS LMSHAGGPRL VGLAPLMGSY GRDAGDWSRP LYQPPRNDPP ATEFFIRLVS PVENIASVIG
301: KGGALINQLR QETRATIKVD SSRTEGNDCL ITISAREVFE DAYSPTIEAV MRLQPKCSDK VERDSGLVSF TTRLLVPSSR IGCILGKGGA IITEMRRMTK
401: ANIRILGKEN LPKVASDDDE MVQISGELDV AKEALIQITS RLRANVFDRE GAVSALMPVL PYVPVAPDAG DRFDYDSRDS RRLERGNPYP GGYGSSGVSA
501: EGYSPYGAPV GGSSSTPYGV YGGYASGRSS SSG
Arabidopsis Description
RNA-binding KH domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q0WNX3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.