CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74462	Soybean	nucleus	86.91	86.2
KRH49838	Soybean	plastid	37.32	38.64
KRH42077	Soybean	plastid	36.33	37.82
KRH47290	Soybean	mitochondrion, nucleus	31.26	34.17
PGSC0003DMT400041750	Potato	plastid	33.55	33.44
Solyc11g010840.1.1	Tomato	plastid	32.9	32.79
AT2G22600.1	Thale cress	mitochondrion	33.88	32.75
CDY13742	Canola	mitochondrion	33.22	32.43
KRH21739	Soybean	plastid	37.81	32.31
Bra038508.1-P	Field mustard	cytosol, plastid	33.55	32.08
CDY25609	Canola	cytosol	32.57	32.05
CDX76904	Canola	mitochondrion, nucleus, peroxisome, plastid	33.06	32.01
Bra030226.1-P	Field mustard	plastid	32.41	31.94
CDX89490	Canola	cytosol	32.24	31.83
KRH44614	Soybean	mitochondrion, nucleus	29.3	31.68
KRH10613	Soybean	plastid	36.01	30.26
KRH58152	Soybean	cytosol	6.06	29.13
KRH52837	Soybean	plastid	29.46	26.63
KRH62129	Soybean	plastid	29.13	26.25
KRG93559	Soybean	nucleus	23.08	25.73
KRH18467	Soybean	nucleus	22.75	25.36
KRH01196	Soybean	nucleus	22.26	25.05
KRH40065	Soybean	nucleus	21.93	24.81
OQU88922	Sorghum	nucleus, peroxisome, plastid	24.88	23.6
KRH58669	Soybean	endoplasmic reticulum, nucleus	23.4	23.03
KRH53532	Soybean	nucleus	23.9	22.57
KRH42565	Soybean	nucleus	22.91	22.4
KRH64403	Soybean	nucleus	23.57	22.36
Zm00001d019538_P002	Maize	plastid	23.73	21.48
KRH12329	Soybean	cytosol, nucleus	14.73	20.36
Os07t0439100-01	Rice	cytosol	7.69	20.17
KRH37335	Soybean	cytosol, nucleus	14.24	19.64
KRH00973	Soybean	nucleus, plastid	11.62	19.61
KRH02776	Soybean	nucleus	13.91	19.5
KRH19104	Soybean	nucleus	13.58	19.04
KRH40252	Soybean	cytosol, golgi, nucleus, plastid	11.95	18.81
KRG97000	Soybean	nucleus	12.77	17.49
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	12.44	17.16
KRH71306	Soybean	nucleus	11.13	13.74
KRH67322	Soybean	nucleus	11.78	13.61
KRG95633	Soybean	nucleus	11.95	13.59
KRH32136	Soybean	cytosol	11.95	12.92

Protein Annotations

EntrezGene:100798433	Gene3D:3.30.1370.10	Gene3D:3.30.310.210	MapMan:35.1	EMBL:ACUP02005935	EnsemblPlantsGene:GLYMA_09G200300
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	UniProt:I1L4S8	InterPro:IPR036612
InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	EnsemblPlants:KRH39475	ProteinID:KRH39475	ProteinID:KRH39475.1
PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288	PANTHER:PTHR10288:SF160	SMART:SM00322	SUPFAM:SSF54791
UniParc:UPI0002337E56	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:42465972..42471158

Molecular Weight (calculated)

65018.0 Da

IEP (calculated)

7.100

GRAVY (calculated)

-0.175

Length

611 amino acids

Sequence
(BLAST)

001: MQDPATSDTT DHQTTPSPSP SPKRKTTTTT TTTNRSNNKR PVFKVLPGQI AFRLVCHASI VGGLIGSSGS IVSQLRRETA CKIHCEDSLS SAEDRVILVI
101: GSVSPRKGLQ LGDGGEVEVS SAQEAIVRVF ERVWGLEAEK GVNSNRAVNS EVFSKLLAHT SQIGAVVGKG GKNITAIRNS TGAKIRVCPP PQCATKDEEL
201: VLITGGILAV KKALISVSHC LQDCPPLCKV PVSSSIPTVS SFDRSSSDPN AELFPRLNSL LTSMEGLSIY ERTTNSNESS NRDSKGGEHE VVFRLLCSNN
301: VAGSVIGKRG AIVRALESKT GASIIFAAPL SEHAERIVTI SAIESLESCN SPAQDAVILV FARIIEDHIG KGFLQVSSME SPVTARLLVA TSTVNSWSGN
401: EGQVILELRE VTGADIQILH GESVPNGASD DDVVVQITGE YRCVQNALYK ITSRIRDNLS PNEAVTEARP KSNWKVNKDP VKGKPFSRGK SAFPSGRFLP
501: RNAGVHAETI LQNGELHTDL SENLERGRGN MFATVTNTTV EIIVSEHVFG SVYGEDGGNL DRIRQISGAT VTVYDPSVGT SGGKVVISGT PDQTLAAQSL
601: LQAFIQTGEV S

Best Arabidopsis Sequence Match ( AT2G22600.1 )
(BLAST)

001: MNNRRGVTTA VSKRRPVIHV LPDETAIRVV CHASVIGGII GSNGYVVSKL RRETGTKIHC ESPVNGSDHW VVFIVGSTAV NQSILLTDRV GEFSGGEHED
101: WVTCEVSAAQ TALIRVLERS WVVLAAKDGG GVVDGEDEEA YCGILADRNQ IGAVLGLGGK NVEWMRRNSG AMIRVLPPPI CGTKNDELIQ ITGDVLAVKK
201: ALVMVSSYIQ NNAPLNGYPP PLSIKGYESL STDGNSEDPH SEFFPNLRSS SLSNATEIVA SNRHLPYDGG NSTERKVVFK IIFTSVVAGG IIGKQGTIIR
301: ALQNETGASI SVGAPLKVSG ERVVTVSARE NLESRYSHAQ NALALVFARS VEIDVEKGLR PGLHNGAIVK TKLLVPSHFA NSFNGNGNRE AIIATGADVH
401: ISVGNQVLEW ISENEVVIEI KGEYSHVQKA LTHVSSKLRE NLLPKKVLGE MRARVSNPYE SAGGRSQIYN LQPSQQDASR GDSLSVSAAV PDLKMVRSGA
501: EVLKSNSVMH TEVLKEVDEL NDFTLPQSLL EEDLTQGMKQ LQMSSNGDVS SLPPRSKGVS VRKITLELAV EKDALGSLYG RDGTGVDNLQ QISGANVDVK
601: DPTGTEATVL ISGNPEQART AMSLIESILT DQ

Arabidopsis Description

RNA-binding KH domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IJK5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.