CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62129	Soybean	plastid	92.9	92.63
VIT_18s0001g08280.t01	Wine grape	cytosol	65.68	63.34
Solyc04g077060.2.1	Tomato	nucleus	40.38	57.72
PGSC0003DMT400012623	Potato	nucleus, plastid	56.07	56.15
GSMUA_Achr6P13890_001	Banana	cytosol	51.92	53.59
GSMUA_Achr10P...	Banana	cytosol	50.15	51.21
Os01t0235800-01	Rice	cytosol	32.4	46.79
Zm00001d009014_P004	Maize	nucleus	42.31	40.57
TraesCS3D01G166400.1	Wheat	cytosol, mitochondrion, nucleus	41.72	40.0
TraesCS3B01G189700.1	Wheat	nucleus	41.57	39.69
EES02175	Sorghum	nucleus, plastid	41.72	39.39
TraesCS3A01G158700.1	Wheat	nucleus	40.98	39.29
HORVU3Hr1G057270.16	Barley	plastid	41.27	35.95
KRH47290	Soybean	mitochondrion, nucleus	29.29	35.42
KRH44614	Soybean	mitochondrion, nucleus	29.29	35.04
KRH42077	Soybean	plastid	29.29	33.73
KRH49838	Soybean	plastid	29.14	33.39
KRH40065	Soybean	nucleus	25.0	31.3
KRH21739	Soybean	plastid	32.84	31.05
KRH01196	Soybean	nucleus	24.85	30.94
KRG93559	Soybean	nucleus	25.0	30.84
KRH18467	Soybean	nucleus	25.0	30.84
KRH58152	Soybean	cytosol	5.62	29.92
KRH10613	Soybean	plastid	32.1	29.85
KRH39475	Soybean	plastid	26.63	29.46
KRH58669	Soybean	endoplasmic reticulum, nucleus	26.18	28.5
KRH42565	Soybean	nucleus	26.33	28.48
KRH64403	Soybean	nucleus	26.33	27.64
KRH53532	Soybean	nucleus	26.04	27.2
KRH74462	Soybean	nucleus	23.52	25.81
KRH00973	Soybean	nucleus, plastid	13.76	25.69
KRH40252	Soybean	cytosol, golgi, nucleus, plastid	13.76	23.97
KRH02776	Soybean	nucleus	13.76	21.33
KRH19104	Soybean	nucleus	13.31	20.64
KRH12329	Soybean	cytosol, nucleus	11.69	17.87
KRH37335	Soybean	cytosol, nucleus	11.69	17.83
KRG97000	Soybean	nucleus	11.69	17.71
KRH68752	Soybean	cytoskeleton, cytosol, nucleus	11.39	17.38
KRH71306	Soybean	nucleus	12.13	16.57
KRH67322	Soybean	nucleus	12.72	16.26
KRG95633	Soybean	nucleus	12.57	15.83
KRH32136	Soybean	cytosol	12.57	15.04

Protein Annotations

EntrezGene:100785136	Gene3D:3.30.1370.10	MapMan:35.1	EMBL:ACUP02003436	EnsemblPlantsGene:GLYMA_06G090100	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR036612	UniProt:K7KU23	InterPro:KH_dom
InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	EnsemblPlants:KRH52837	ProteinID:KRH52837	ProteinID:KRH52837.1	ProteinID:KRH52838.1
ProteinID:KRH52839.1	ProteinID:KRH52840.1	ProteinID:KRH52841.1	PFAM:PF00013	PFscan:PS50084	PANTHER:PTHR10288
PANTHER:PTHR10288:SF148	SMART:SM00322	SUPFAM:SSF54791	UniParc:UPI000233A4A0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:6985471..6996418

Molecular Weight (calculated)

72831.7 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.397

Length

676 amino acids

Sequence
(BLAST)

001: MTSSKRPNAG PNGRGKRRRS SGGFSSLGVS PGSVVFRLLC HASRIGGVIG KGGSIISQIR QETGVKLRIE EAVPGCDERV ITISGSEKET EEDNTEQGKE
101: VNDNDDGGSE GKDREEKDDG DGNEDKREKD AVPVEDSKSE KGNSAIWKAI SLVFERMVEG VEETTEGDEE SNKPSSFFLR LLILTAQVGC VLGKGGSVIK
201: RMAAESGAQI RILPKDKLPA CASASDEIVQ ISGSVEVVRK ALQSVSQQLL ENPPRDHDSL SAKSTGPSSH SFGQFPPHNR SFSAQGEPFA SGPHDISAFH
301: SAAPLIPKFH EAAIHGRMRP LQEMLTFRLL CPAERVGNII GKGGAIIKTV QQETASEIKV LEAPPDSEDC VIVISGPAHP EDRISPVQEA VFRVQTRIAK
401: PIPDAKDHIM LARFLVSSTQ IGCLLGKGGS IITEMRKKSG AHIRILGKDK VPKCASEDEE VIQVNGEIEA VHDALLQITT RLKHHCFRDS YPSVNYPSNS
501: PFLDQLPPFP PYLGRRGLSP PRMYSDLGHP HPHAGFPLDD RPPFLNSIHR PGLPPHISER KPWGPQGILE GGIPIGLPDF PGGPPRRISG FAGGSQPIIT
601: STTVEVVVPR AVVPVIYGED GECLKQILQI SDANITITDP KPGTVETKII ISGTPEQTHA AQSLIQAFVM SERESV

Best Arabidopsis Sequence Match ( AT1G51580.1 )
(BLAST)

001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S

Arabidopsis Description

At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.