Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G158700.1 | Wheat | nucleus | 98.16 | 98.16 |
| TraesCS3B01G189700.1 | Wheat | nucleus | 98.3 | 97.88 |
| HORVU3Hr1G057270.16 | Barley | plastid | 94.18 | 85.57 |
| Os01t0235800-01 | Rice | cytosol | 50.92 | 76.71 |
| EES02175 | Sorghum | nucleus, plastid | 66.67 | 65.64 |
| Zm00001d009014_P004 | Maize | nucleus | 65.11 | 65.11 |
| GSMUA_Achr6P13890_001 | Banana | cytosol | 44.68 | 48.09 |
| GSMUA_Achr10P... | Banana | cytosol | 44.4 | 47.28 |
| VIT_18s0001g08280.t01 | Wine grape | cytosol | 44.54 | 44.79 |
| KRH52837 | Soybean | plastid | 40.0 | 41.72 |
| KRH62129 | Soybean | plastid | 39.29 | 40.86 |
| Solyc04g077060.2.1 | Tomato | nucleus | 26.81 | 39.96 |
| PGSC0003DMT400012623 | Potato | nucleus, plastid | 38.01 | 39.7 |
| TraesCS4D01G160700.2 | Wheat | nucleus | 20.99 | 26.29 |
| TraesCS5D01G284200.4 | Wheat | plastid | 22.13 | 24.88 |
| TraesCS5D01G538200.3 | Wheat | nucleus | 22.13 | 24.76 |
| TraesCS3D01G519700.1 | Wheat | nucleus | 22.13 | 24.72 |
| TraesCS7D01G341400.1 | Wheat | nucleus | 20.0 | 20.95 |
| TraesCS1D01G161200.3 | Wheat | nucleus | 22.55 | 19.11 |
| TraesCS5D01G071000.1 | Wheat | nucleus | 14.04 | 19.08 |
| TraesCS4D01G068400.1 | Wheat | nucleus | 13.9 | 19.07 |
| TraesCS1D01G218700.1 | Wheat | cytosol | 11.91 | 18.67 |
| TraesCS1D01G134700.1 | Wheat | cytosol | 13.19 | 15.5 |
Protein Annotations
| Gene3D:3.30.1370.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PFAM:PF00013 | PFscan:PS50084 |
| PANTHER:PTHR10288 | PANTHER:PTHR10288:SF148 | SMART:SM00322 | SUPFAM:SSF54791 | EnsemblPlantsGene:TraesCS3D01G166400 | EnsemblPlants:TraesCS3D01G166400.1 |
| TIGR:cd00105 | TIGR:cd02396 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:138885589..138889394
Molecular Weight (calculated)
76080.8 Da
IEP (calculated)
6.476
GRAVY (calculated)
-0.408
Length
705 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHAYPSKR PFQKKYSEHN GRAKWQKTKH APSQQPQLTI QPGVPLIRIL CPTEKCGNVI GKGGSIIAKI RQENGVKIRV DEAVPGCDER VIVITTVEKD
101: KEASHEQGKE NDGGTAVSAD GEHEKEKDHS KEEKDDSDNA HGKEEQDDAE RDDSKEENDD SSVAKTTKLE PERVIPSAMN AVLHVFDRIF ITESENGTGD
201: ASGQKTPLSF RLLVLDSQVG SLLGIRGSVI KQMSADSGCE IRVSKENLPL CALLKDELCQ INGELDSVRK GLNAVAQVLF THPPRESDVV PVVHPSGSSS
301: RTFDRSDGLP PGMPPNFHLP FQGPSHARGP FDTIDQRPNV APFPTFPDQR SNIPPFSAFP DALMHGNASV PPEPLTFRLL CSSDKVGSII GKGGNSIKTI
401: QKDTGCEIKI LETIPKSDDH IIIISGPAHP GDGISPAQNA ILHVQRKITP PTSNKEGPAI SRLIVSPNQV GCLLGKGGSI IAEMRKLSKA HIIVLSKDKI
501: PRGVQEIDEV VQITGDSEAI QEALMQITAR LRNNLFRDRM ASMGPSMQPP FGLLDPQFGA FAGIHESTSP RIYPNASQFH KDFMGRPLDE MPAPWTTKDV
601: GDPMSISGIP GMAHRGMGGF SGPVHSSRPI ITGNIMVPRL VIPALCGHDG GCLNLIREFS GAKITIDEPL ADSIDTPVMI SGTPDQMHAA RSLVQAFVLS
701: EPPAS
101: KEASHEQGKE NDGGTAVSAD GEHEKEKDHS KEEKDDSDNA HGKEEQDDAE RDDSKEENDD SSVAKTTKLE PERVIPSAMN AVLHVFDRIF ITESENGTGD
201: ASGQKTPLSF RLLVLDSQVG SLLGIRGSVI KQMSADSGCE IRVSKENLPL CALLKDELCQ INGELDSVRK GLNAVAQVLF THPPRESDVV PVVHPSGSSS
301: RTFDRSDGLP PGMPPNFHLP FQGPSHARGP FDTIDQRPNV APFPTFPDQR SNIPPFSAFP DALMHGNASV PPEPLTFRLL CSSDKVGSII GKGGNSIKTI
401: QKDTGCEIKI LETIPKSDDH IIIISGPAHP GDGISPAQNA ILHVQRKITP PTSNKEGPAI SRLIVSPNQV GCLLGKGGSI IAEMRKLSKA HIIVLSKDKI
501: PRGVQEIDEV VQITGDSEAI QEALMQITAR LRNNLFRDRM ASMGPSMQPP FGLLDPQFGA FAGIHESTSP RIYPNASQFH KDFMGRPLDE MPAPWTTKDV
601: GDPMSISGIP GMAHRGMGGF SGPVHSSRPI ITGNIMVPRL VIPALCGHDG GCLNLIREFS GAKITIDEPL ADSIDTPVMI SGTPDQMHAA RSLVQAFVLS
701: EPPAS
001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
Arabidopsis Description
At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.