Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G189700.1 | Wheat | nucleus | 86.34 | 94.63 |
| TraesCS3D01G166400.1 | Wheat | cytosol, mitochondrion, nucleus | 85.57 | 94.18 |
| TraesCS3A01G158700.1 | Wheat | nucleus | 85.44 | 94.04 |
| Os01t0235800-01 | Rice | cytosol | 45.75 | 75.85 |
| EES02175 | Sorghum | nucleus, plastid | 60.31 | 65.36 |
| Zm00001d009014_P004 | Maize | nucleus | 57.86 | 63.69 |
| GSMUA_Achr6P13890_001 | Banana | cytosol | 40.21 | 47.63 |
| GSMUA_Achr10P... | Banana | cytosol | 40.21 | 47.13 |
| VIT_18s0001g08280.t01 | Wine grape | cytosol | 39.56 | 43.79 |
| KRH52837 | Soybean | plastid | 35.95 | 41.27 |
| KRH62129 | Soybean | plastid | 35.44 | 40.56 |
| Solyc04g077060.2.1 | Tomato | nucleus | 23.84 | 39.11 |
| PGSC0003DMT400012623 | Potato | nucleus, plastid | 33.76 | 38.81 |
| HORVU4Hr1G049680.1 | Barley | nucleus | 19.97 | 26.63 |
| HORVU5Hr1G075110.3 | Barley | mitochondrion | 21.39 | 25.78 |
| HORVU5Hr1G121900.1 | Barley | nucleus | 19.59 | 24.05 |
| HORVU0Hr1G007380.3 | Barley | mitochondrion, nucleus | 19.07 | 23.42 |
| HORVU7Hr1G082230.1 | Barley | nucleus | 17.91 | 22.2 |
| HORVU1Hr1G036300.1 | Barley | cytosol | 5.15 | 21.98 |
| HORVU1Hr1G043680.7 | Barley | nucleus | 20.75 | 19.75 |
| HORVU4Hr1G011610.11 | Barley | cytoskeleton, cytosol, nucleus | 11.6 | 16.61 |
| HORVU1Hr1G055480.1 | Barley | plastid | 10.7 | 16.53 |
| HORVU6Hr1G014510.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 9.41 | 14.75 |
| HORVU1Hr1G036280.1 | Barley | cytosol | 6.31 | 11.95 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G057270.16 | EnsemblPlantsGene:HORVU3Hr1G057270 | Gene3D:3.30.1370.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PANTHER:PTHR10288 |
| PANTHER:PTHR10288:SF148 | PFAM:PF00013 | PFscan:PS50084 | SEG:seg | SMART:SM00322 | SUPFAM:SSF54791 |
| UniParc:UPI000B47B226 | UniProt:A0A287L5Q6 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:429449866..429456332
Molecular Weight (calculated)
84275.9 Da
IEP (calculated)
8.375
GRAVY (calculated)
-0.456
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: RTFWPTQTFK LRASAEAQQK GSEKRVKKQS FLFLLPSRRR RRNPLRRTPP PLQPLFRRSA GTSKAGYDMA SHAYSSKRPF QKNSSEHNGR AKWQKTKHAP
101: SQQPQMTIQP GVPLIRILCP TERCGNVIGK AGSIIAKIRK ENGVKIRVDE AVPGCDERVI VITTVEKDKE ASHEQGKQND DGTAVSGDGE HAKEEDHSKE
201: EKDDSDNAHG KEEQDDAERG DSKEENDDSS VAKTTKLEPE RVIPSAMNAI LHVFDRIFIT ESKNGTGDAP GQKTPVSFRL LVLDSQVGPL LGIRGSVIKQ
301: MSADSGCEIR VSKENLPLCA LLKDELCQIN GELDSVRKGL NAVAQVLFTH PPRESDVVPI VHPSGSSSHT FDRSDGLPPG MPPNFHLPFQ GPSHARGPFD
401: IIDERPNVAP FSAFPDQRSN IPPFSSFPDA LMHGNASVPP EPLTFRLLCS SDKVGSIIGK GGNIIKTIQK DTGCEIKIVE TVPKSDDHII IISGPAHPGD
501: GISPAQNAIL HVQRKITPTT SNKEGPALSR LIVSPNQVGC LLGKGGSIMA EMRKLSKAHI IVLSKDKIPR GVQNIAEVVQ ITGDSEAIQE ALMQITARLR
601: NNLFRDRMAS MGPSMQPPFG LLDPQFGAFP GIHESTSPRI YPNASQFHKD FMGRPLDEMS APWTTKGMQD VGDPMSISGV PGMAHRGIGG FSGPVHSSRP
701: IITGNIMVPR LIIPALCGHD GGCLNMIREF SGAKITIDEP LADSMDTPVM ISGTPDQMHA ARSLVQAFVL SEPPAP
101: SQQPQMTIQP GVPLIRILCP TERCGNVIGK AGSIIAKIRK ENGVKIRVDE AVPGCDERVI VITTVEKDKE ASHEQGKQND DGTAVSGDGE HAKEEDHSKE
201: EKDDSDNAHG KEEQDDAERG DSKEENDDSS VAKTTKLEPE RVIPSAMNAI LHVFDRIFIT ESKNGTGDAP GQKTPVSFRL LVLDSQVGPL LGIRGSVIKQ
301: MSADSGCEIR VSKENLPLCA LLKDELCQIN GELDSVRKGL NAVAQVLFTH PPRESDVVPI VHPSGSSSHT FDRSDGLPPG MPPNFHLPFQ GPSHARGPFD
401: IIDERPNVAP FSAFPDQRSN IPPFSSFPDA LMHGNASVPP EPLTFRLLCS SDKVGSIIGK GGNIIKTIQK DTGCEIKIVE TVPKSDDHII IISGPAHPGD
501: GISPAQNAIL HVQRKITPTT SNKEGPALSR LIVSPNQVGC LLGKGGSIMA EMRKLSKAHI IVLSKDKIPR GVQNIAEVVQ ITGDSEAIQE ALMQITARLR
601: NNLFRDRMAS MGPSMQPPFG LLDPQFGAFP GIHESTSPRI YPNASQFHKD FMGRPLDEMS APWTTKGMQD VGDPMSISGV PGMAHRGIGG FSGPVHSSRP
701: IITGNIMVPR LIIPALCGHD GGCLNMIREF SGAKITIDEP LADSMDTPVM ISGTPDQMHA ARSLVQAFVL SEPPAP
001: MEFSTSKRPA TTATAAESVH FRLLCPATRT GAIIGKGGSV IRHLQSVTGS KIRVIDDIPV PSEERVVLII APSGKKKDES NVCDSENPGS EEPKQEKGSE
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
101: CAGTSGGDDE EAPSSAQMAL LRVFERIVFG DDAATVDGDE LDKGESEGLC RMIVRGNQVD YLMSKGGKMI QKIREDSGAI VRISSTDQIP PCAFPGDVVI
201: QMNGKFSSVK KALLLVTNCL QESGAPPTWD ECPFPQPGYP PEYHSMEYHP QWDHPPPNPM PEDVGPFNRP VVEEEVAFRL LCPADKVGSL IGKGGAVVRA
301: LQNESGASIK VSDPTHDSEE RIIVISAREN LERRHSLAQD GVMRVHNRIV EIGFEPSAAV VARLLVHSPY IGRLLGKGGH LISEMRRATG ASIRVFAKDQ
401: ATKYESQHDE IVQVIGNLKT VQDALFQILC RLREAMFPGR LPFQGMGGPP PPFMGPYPEP PPPFGPRQYP ASPDRYHSPV GPFHERHCHG PGFDRPPGPG
501: FDRPPSPMSW TPQPGIDGHP GGMVPPDVNH GFALRNEPIG SENPVMTSAN VEIVIPQAYL GHVYGENCSN LNYIKQVSGA NVVVHDPKAG TTEGLVVVSG
601: TSDQAHFAQS LLHAFILCGQ S
Arabidopsis Description
At1g51580 [Source:UniProtKB/TrEMBL;Acc:Q9C553]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.