Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003290_P002 | Maize | mitochondrion | 49.45 | 39.3 |
| TraesCS1A01G136600.1 | Wheat | cytosol, mitochondrion, nucleus | 93.96 | 28.55 |
| TraesCS1B01G155000.1 | Wheat | cytosol, mitochondrion, nucleus | 93.41 | 28.38 |
| TraesCS1D01G134700.1 | Wheat | cytosol | 92.86 | 28.17 |
| Zm00001d010815_P001 | Maize | mitochondrion | 53.3 | 27.71 |
| Solyc06g084010.2.1 | Tomato | nucleus | 37.91 | 21.36 |
| EER94248 | Sorghum | nucleus | 63.74 | 19.73 |
| Zm00001d014180_P004 | Maize | cytosol | 63.74 | 17.93 |
| Os10t0414700-01 | Rice | nucleus | 60.99 | 17.82 |
| VIT_07s0141g00800.t01 | Wine grape | cytosol | 37.91 | 15.94 |
| CDY64706 | Canola | nucleus | 34.07 | 15.35 |
| KRG97000 | Soybean | nucleus | 35.71 | 14.57 |
| KRH68752 | Soybean | cytoskeleton, cytosol, nucleus | 35.16 | 14.45 |
| VIT_14s0081g00440.t01 | Wine grape | cytosol | 40.11 | 14.29 |
| KRH71306 | Soybean | nucleus | 37.91 | 13.94 |
| PGSC0003DMT400051668 | Potato | cytosol | 37.36 | 13.28 |
| KRH67322 | Soybean | nucleus | 38.46 | 13.23 |
| KRG95633 | Soybean | nucleus | 38.46 | 13.04 |
| PGSC0003DMT400051262 | Potato | nucleus | 35.71 | 12.95 |
| Bra001111.1-P | Field mustard | cytosol | 27.47 | 12.82 |
| Solyc09g066120.2.1 | Tomato | nucleus | 34.07 | 12.6 |
| CDX74180 | Canola | cytosol | 37.91 | 12.26 |
| CDY40663 | Canola | cytosol | 37.91 | 12.26 |
| KRH32136 | Soybean | cytosol | 37.36 | 12.04 |
| HORVU4Hr1G011610.11 | Barley | cytoskeleton, cytosol, nucleus | 35.71 | 11.99 |
| AT3G04610.2 | Thale cress | cytosol | 37.91 | 11.96 |
| HORVU1Hr1G055480.1 | Barley | plastid | 32.97 | 11.95 |
| HORVU6Hr1G014510.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 28.57 | 10.51 |
| Solyc01g097010.2.1 | Tomato | nucleus | 17.58 | 8.82 |
| HORVU4Hr1G049680.1 | Barley | nucleus | 26.92 | 8.42 |
| HORVU0Hr1G007380.3 | Barley | mitochondrion, nucleus | 21.43 | 6.17 |
| HORVU5Hr1G121900.1 | Barley | nucleus | 21.43 | 6.17 |
| HORVU7Hr1G082230.1 | Barley | nucleus | 19.78 | 5.75 |
| HORVU1Hr1G043680.7 | Barley | nucleus | 24.73 | 5.52 |
| HORVU3Hr1G057270.16 | Barley | plastid | 21.98 | 5.15 |
| HORVU5Hr1G075110.3 | Barley | mitochondrion | 9.89 | 2.8 |
| Solyc06g084000.2.1 | Tomato | nucleus | 0.0 | 0.0 |
| HORVU1Hr1G036280.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G036300.1 | EnsemblPlantsGene:HORVU1Hr1G036300 | Gene3D:3.30.310.210 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PANTHER:PTHR10288 |
| PANTHER:PTHR10288:SF152 | PFAM:PF00013 | PFscan:PS50084 | SMART:SM00322 | SUPFAM:SSF54791 | UniParc:UPI000B472709 |
| UniProt:A0A287F4S4 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:243012285..243015381
Molecular Weight (calculated)
20178.3 Da
IEP (calculated)
4.757
GRAVY (calculated)
-0.193
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEMQRNSTE RWVTQMVRKS QKEALGTVRG QDITDDVGPG DHTTCSADEN RYPDWPGTTV FRMLISATKL GSIIGYKGER VRRLCEETKA CIRIIGGHLA
101: GAERAVIIFA TEQPDELIPP AMDALLRVYQ HIIYDDGLDM GSDSTVVARI LIPSEQAMSL IGEQGVMIYS IEEASKTNIY VL
101: GAERAVIIFA TEQPDELIPP AMDALLRVYQ HIIYDDGLDM GSDSTVVARI LIPSEQAMSL IGEQGVMIYS IEEASKTNIY VL
001: MAEAEDQQNF VAHNGDQVPD QGSDELHNGL PYQVHDETLV HQPYEVEDPI LEPQQYEVDD QLEYHQYQLQ DQANEDVQDH SQDDLQYQPQ NQEQFQLQDE
101: AHDQAQYQAQ GDVQDHNGDE VQDKVEDEEG IPEHLESLQK SEPEEDATVG GEEKRWPGWP GETVFRMLVP AQKVGSIIGR KGDVIKKIVE ETRARIKILD
201: GPPGTTERAV MVSGKEEPES SLPPSMDGLL RVHMRIVDGL DGEASQAPPP SKVSTRLLVP ASQAGSLIGK QGGTVKAIQE ASACIVRVLG SEDLPVFALQ
301: DDRVVEVVGE PTSVHRALEL IASHLRKFLV DRSIIPFFEN QMQKPTRQMD HMPPPHQSWG PPQGHAPSVG GGGYGHNPPP YMQPPPRHDS YYPPPEMRQP
401: PMEKQPHQGI SAYGREPPMN VHVSSAPPMV AQQVTQQMQI PLSYADAVIG TSGSNISYTR RLSGATVTIQ ETRGVPGEMT VEVSGTGSQV QTAVQLIQNF
501: MAEAGAPAPA QPQTVAPEQQ GYNPYATHGS VYAAAPTNPP GGYATDYSSG YGY
101: AHDQAQYQAQ GDVQDHNGDE VQDKVEDEEG IPEHLESLQK SEPEEDATVG GEEKRWPGWP GETVFRMLVP AQKVGSIIGR KGDVIKKIVE ETRARIKILD
201: GPPGTTERAV MVSGKEEPES SLPPSMDGLL RVHMRIVDGL DGEASQAPPP SKVSTRLLVP ASQAGSLIGK QGGTVKAIQE ASACIVRVLG SEDLPVFALQ
301: DDRVVEVVGE PTSVHRALEL IASHLRKFLV DRSIIPFFEN QMQKPTRQMD HMPPPHQSWG PPQGHAPSVG GGGYGHNPPP YMQPPPRHDS YYPPPEMRQP
401: PMEKQPHQGI SAYGREPPMN VHVSSAPPMV AQQVTQQMQI PLSYADAVIG TSGSNISYTR RLSGATVTIQ ETRGVPGEMT VEVSGTGSQV QTAVQLIQNF
501: MAEAGAPAPA QPQTVAPEQQ GYNPYATHGS VYAAAPTNPP GGYATDYSSG YGY
Arabidopsis Description
FLKFlowering locus K homology domain [Source:UniProtKB/Swiss-Prot;Acc:Q9SR13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.