Factsheet for HORVU1Hr1G055480.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G229900.1	Wheat	cytosol	88.05	98.44
TraesCS1D01G218700.1	Wheat	cytosol	87.85	98.0
TraesCS1A01G216900.1	Wheat	cytosol	87.25	97.33
EER94472	Sorghum	cytosol	76.89	85.4
Zm00001d000030_P001	Maize	cytosol, extracellular, nucleus, plasma membrane	74.9	85.26
Zm00001d029973_P001	Maize	plasma membrane	74.9	83.93
Os10t0564000-01	Rice	cytosol	76.49	83.84
KRH19104	Soybean	nucleus	49.4	56.88
KRH02776	Soybean	nucleus	49.0	56.42
KRH37335	Soybean	cytosol, nucleus	47.61	53.95
VIT_11s0052g00030.t01	Wine grape	plastid	50.0	53.86
KRH12329	Soybean	cytosol, nucleus	47.41	53.85
Solyc07g008490.2.1	Tomato	nucleus	46.02	47.93
GSMUA_Achr8P14980_001	Banana	cytosol	51.99	46.61
PGSC0003DMT400076105	Potato	plastid	42.03	45.67
Bra019133.1-P	Field mustard	cytosol	36.06	45.48
GSMUA_Achr11P...	Banana	mitochondrion	51.39	45.03
AT4G26000.1	Thale cress	cytosol	43.03	43.64
CDY49999	Canola	cytosol, endoplasmic reticulum, nucleus	41.63	43.54
Solyc05g041740.1.1	Tomato	plastid	18.13	43.33
CDY42768	Canola	cytosol	41.83	42.6
CDX92741	Canola	cytosol	41.63	42.39
Solyc08g074330.1.1	Tomato	plastid	19.12	42.29
Solyc05g043210.1.1	Tomato	plastid	19.92	39.53
PGSC0003DMT400046406	Potato	cytosol	46.02	39.15
Bra013940.1-P	Field mustard	cytosol	31.67	37.41
CDX89376	Canola	cytosol	31.67	37.41
HORVU6Hr1G014510.1	Barley	cytosol, mitochondrion, nucleus, plastid	36.06	36.57
CDY65294	Canola	cytosol	31.87	36.45
Solyc05g042180.1.1	Tomato	plastid	19.32	35.53
HORVU1Hr1G036300.1	Barley	cytosol	11.95	32.97
HORVU4Hr1G011610.11	Barley	cytoskeleton, cytosol, nucleus	34.86	32.29
Solyc05g043200.1.1	Tomato	nucleus, peroxisome, plastid	20.32	31.88
HORVU1Hr1G036280.1	Barley	cytosol	15.94	19.51
HORVU4Hr1G049680.1	Barley	nucleus	21.31	18.38
HORVU5Hr1G121900.1	Barley	nucleus	18.53	14.72
HORVU0Hr1G007380.3	Barley	mitochondrion, nucleus	17.93	14.24
HORVU7Hr1G082230.1	Barley	nucleus	16.53	13.26
HORVU1Hr1G043680.7	Barley	nucleus	18.73	11.53
HORVU5Hr1G075110.3	Barley	mitochondrion	13.94	10.87
HORVU3Hr1G057270.16	Barley	plastid	16.53	10.7

Protein Annotations

EnsemblPlants:HORVU1Hr1G055480.1	EnsemblPlantsGene:HORVU1Hr1G055480	Gene3D:3.30.1370.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR036612	InterPro:KH_dom	InterPro:KH_dom_type_1	InterPro:KH_dom_type_1_sf	PANTHER:PTHR10288
PANTHER:PTHR10288:SF132	PFAM:PF00013	PFscan:PS50084	SEG:seg	SMART:SM00322	SUPFAM:SSF54791
UniParc:UPI000B461298	UniProt:A0A287FPI1	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:406396131..406400301

Molecular Weight (calculated)

53409.1 Da

IEP (calculated)

5.621

GRAVY (calculated)

-0.220

Length

502 amino acids

Sequence
(BLAST)

001: EIKPQCAPYA SIMHTQISCT SSSPSFHLTG LSTPEAAVHT QTLAVATAAS SAMDDPAAAA TAAATEVGAP ASPPPPASEE ADASAEAEAV PEAKRWPGWP
101: GDNVFRMVVP VLKVGSIIGR KGELIKRLVE ETKARVRVLE GPVGATERIV LVSAKEDPGL ELPPAMDALI RVFKRVNGIS DGAAEGTQTS AAPGVCAARL
201: VVPGAQAINL IGKQGASIKA IQEGTGATIR VISVDERDRP FYVTDDERIV EIQGETEKVL KALQAVSNHL RKFLVDHSVL PLFEKTNAPV SQDRSAETWN
301: DMPHHSIVST QVNQQPEVRD EYVLPMKRDH LYLEREPLVE HNIHRSGVSL YGRDPALSAL RPSGMHGAGP LLTQITQTMQ IPLTYAEDII GVKGANIAYI
401: RANSGAVVTI QESLGSPDDI TVEIKGTSSQ VQSAQQLIQD SLAAHREPVR SSYAGLDPLY RSSYPQYGSS AYPSSSLPSY SSIDGSGYSS SGLGGYGSTY
501: RY

Best Arabidopsis Sequence Match ( AT4G26000.1 )
(BLAST)

001: MAAVADSVEN NGSINLPENE NLIPAGFSAA ALLDENSGAF PELNQPDSLA AAETTFPDTN DSAEERWPGW PGDCVFRMIV PVTKVGAIIG RKGDFIKKMC
101: EETRARIKVL DGPVNTPDRI VLISGKEEPE AYMSPAMDAV LRVFRRVSGL PDNDDDDVQN AGSVFSSVRL LVASTQAINL IGKQGSLIKS IVENSGASVR
201: ILSEEETPFY AAQDERIVDL QGEALKILKA LEAIVGHLRR FLVDHTVVPL FEKQYLARVS QTRQEEPLAE SKSSLHTISS NLMEPDFSLL ARREPLFLER
301: DSRVDSRVQP SGVSIYSQDP VLSARHSPGL ARVSSAFVTQ VSQTMQIPFS YAEDIIGVEG ANIAYIRRRS GATITIKESP HPDQITVEIK GTTSQVQTAE
401: QLIQEFIINH KEPVSVSGGY ARIDSGYVPA YPPQLSNRQE PLPSTYMGTE PVQYRPTAYS QLGGPSTYTP TLTGQTYGSE YRPASDVGGY SSYNL

Arabidopsis Description

PEPRNA-binding KH domain-containing protein PEPPER [Source:UniProtKB/Swiss-Prot;Acc:Q9SZH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.