Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d000030_P001 | Maize | cytosol, extracellular, nucleus, plasma membrane | 94.03 | 96.37 |
| Zm00001d029973_P001 | Maize | plasma membrane | 94.03 | 94.87 |
| TraesCS1B01G229900.1 | Wheat | cytosol | 84.96 | 85.52 |
| Os10t0564000-01 | Rice | cytosol | 86.28 | 85.15 |
| TraesCS1D01G218700.1 | Wheat | cytosol | 84.73 | 85.11 |
| TraesCS1A01G216900.1 | Wheat | cytosol | 84.07 | 84.44 |
| HORVU1Hr1G055480.1 | Barley | plastid | 85.4 | 76.89 |
| KRH19104 | Soybean | nucleus | 54.42 | 56.42 |
| KRH02776 | Soybean | nucleus | 53.98 | 55.96 |
| KRH37335 | Soybean | cytosol, nucleus | 53.1 | 54.18 |
| VIT_11s0052g00030.t01 | Wine grape | plastid | 55.53 | 53.86 |
| KRH12329 | Soybean | cytosol, nucleus | 52.65 | 53.85 |
| Solyc07g008490.2.1 | Tomato | nucleus | 50.44 | 47.3 |
| PGSC0003DMT400076105 | Potato | plastid | 46.46 | 45.45 |
| GSMUA_Achr8P14980_001 | Banana | cytosol | 55.75 | 45.0 |
| Solyc05g041740.1.1 | Tomato | plastid | 20.35 | 43.81 |
| Bra019133.1-P | Field mustard | cytosol | 38.27 | 43.47 |
| AT4G26000.1 | Thale cress | cytosol | 46.68 | 42.63 |
| GSMUA_Achr11P... | Banana | mitochondrion | 53.98 | 42.58 |
| CDY49999 | Canola | cytosol, endoplasmic reticulum, nucleus | 44.69 | 42.08 |
| Solyc08g074330.1.1 | Tomato | plastid | 20.8 | 41.41 |
| CDX92741 | Canola | cytosol | 44.91 | 41.18 |
| CDY42768 | Canola | cytosol | 44.69 | 40.97 |
| Solyc05g043210.1.1 | Tomato | plastid | 22.35 | 39.92 |
| PGSC0003DMT400046406 | Potato | cytosol | 50.66 | 38.81 |
| Bra013940.1-P | Field mustard | cytosol | 34.29 | 36.47 |
| CDX89376 | Canola | cytosol | 34.29 | 36.47 |
| CDY65294 | Canola | cytosol | 34.29 | 35.31 |
| Solyc05g042180.1.1 | Tomato | plastid | 21.24 | 35.16 |
| KXG29352 | Sorghum | cytosol | 37.83 | 33.14 |
| EES16283 | Sorghum | cytosol | 36.28 | 32.22 |
| Solyc05g043200.1.1 | Tomato | nucleus, peroxisome, plastid | 21.68 | 30.62 |
| OQU91315 | Sorghum | plastid | 30.53 | 28.4 |
| EER94248 | Sorghum | nucleus | 30.53 | 23.47 |
| KXG39277 | Sorghum | nucleus | 23.45 | 19.56 |
| OQU80050 | Sorghum | nucleus | 19.91 | 14.31 |
| KXG20038 | Sorghum | nucleus | 19.25 | 13.02 |
| OQU88922 | Sorghum | nucleus, peroxisome, plastid | 18.14 | 12.73 |
| EES02175 | Sorghum | nucleus, plastid | 19.03 | 12.01 |
| KXG38256 | Sorghum | nucleus | 19.91 | 11.25 |
| KXG35952 | Sorghum | plastid | 14.6 | 10.61 |
Protein Annotations
| Gene3D:3.30.1370.10 | MapMan:35.1 | EntrezGene:8058065 | UniProt:C5WRH2 | EnsemblPlants:EER94472 | ProteinID:EER94472 |
| ProteinID:EER94472.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR036612 |
| InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf | PFAM:PF00013 | PFscan:PS50084 | PANTHER:PTHR10288 |
| PANTHER:PTHR10288:SF132 | SMART:SM00322 | EnsemblPlantsGene:SORBI_3001G294900 | SUPFAM:SSF54791 | unigene:Sbi.11240 | UniParc:UPI0001A82EC5 |
| RefSeq:XP_002467474.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:57353766..57357389
Molecular Weight (calculated)
48100.1 Da
IEP (calculated)
5.328
GRAVY (calculated)
-0.121
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEPSAAAVT AADVGALASL PPLVAEEADA AAMEEAAAAA KRWPGWPGDS VFRLVVPVLK VGSIIGRKGE LIKRLVEETK ARVRILEGPV GATERIVLVS
101: GKEDPGLELP PAMDALMRVF KRVIGITDGA AEGTQAAATP GVCAARLLVP GAQAINLIGK QGATIKAIQE STGATIRVIS VDERERPFYV TDDERIIEIQ
201: GDTEKVLKAL QAVSNHLRKF LVDHSVLPLF EKTNTTVSQD RNGDGWSDMS HPSIGSAQVN QPPSVVDEYI LPVKRESLYL EREPLVDHNI HRSGVSLYGR
301: DPALSTLRPS GIHGAGPLLT QITQTMQIPL TYAEDIIGVK GANIAYIRAN SGAVVTIQES LGSPDDITVE IKGTSSQVQA AQQLIQDSLA AHREPVRSSY
401: VGAGLDSVYR SSYSQYGSST YPSSSLPSYS SIDDVSRYPS SGLGGYGSSY RY
101: GKEDPGLELP PAMDALMRVF KRVIGITDGA AEGTQAAATP GVCAARLLVP GAQAINLIGK QGATIKAIQE STGATIRVIS VDERERPFYV TDDERIIEIQ
201: GDTEKVLKAL QAVSNHLRKF LVDHSVLPLF EKTNTTVSQD RNGDGWSDMS HPSIGSAQVN QPPSVVDEYI LPVKRESLYL EREPLVDHNI HRSGVSLYGR
301: DPALSTLRPS GIHGAGPLLT QITQTMQIPL TYAEDIIGVK GANIAYIRAN SGAVVTIQES LGSPDDITVE IKGTSSQVQA AQQLIQDSLA AHREPVRSSY
401: VGAGLDSVYR SSYSQYGSST YPSSSLPSYS SIDDVSRYPS SGLGGYGSSY RY
001: MAAVADSVEN NGSINLPENE NLIPAGFSAA ALLDENSGAF PELNQPDSLA AAETTFPDTN DSAEERWPGW PGDCVFRMIV PVTKVGAIIG RKGDFIKKMC
101: EETRARIKVL DGPVNTPDRI VLISGKEEPE AYMSPAMDAV LRVFRRVSGL PDNDDDDVQN AGSVFSSVRL LVASTQAINL IGKQGSLIKS IVENSGASVR
201: ILSEEETPFY AAQDERIVDL QGEALKILKA LEAIVGHLRR FLVDHTVVPL FEKQYLARVS QTRQEEPLAE SKSSLHTISS NLMEPDFSLL ARREPLFLER
301: DSRVDSRVQP SGVSIYSQDP VLSARHSPGL ARVSSAFVTQ VSQTMQIPFS YAEDIIGVEG ANIAYIRRRS GATITIKESP HPDQITVEIK GTTSQVQTAE
401: QLIQEFIINH KEPVSVSGGY ARIDSGYVPA YPPQLSNRQE PLPSTYMGTE PVQYRPTAYS QLGGPSTYTP TLTGQTYGSE YRPASDVGGY SSYNL
101: EETRARIKVL DGPVNTPDRI VLISGKEEPE AYMSPAMDAV LRVFRRVSGL PDNDDDDVQN AGSVFSSVRL LVASTQAINL IGKQGSLIKS IVENSGASVR
201: ILSEEETPFY AAQDERIVDL QGEALKILKA LEAIVGHLRR FLVDHTVVPL FEKQYLARVS QTRQEEPLAE SKSSLHTISS NLMEPDFSLL ARREPLFLER
301: DSRVDSRVQP SGVSIYSQDP VLSARHSPGL ARVSSAFVTQ VSQTMQIPFS YAEDIIGVEG ANIAYIRRRS GATITIKESP HPDQITVEIK GTTSQVQTAE
401: QLIQEFIINH KEPVSVSGGY ARIDSGYVPA YPPQLSNRQE PLPSTYMGTE PVQYRPTAYS QLGGPSTYTP TLTGQTYGSE YRPASDVGGY SSYNL
Arabidopsis Description
PEPRNA-binding KH domain-containing protein PEPPER [Source:UniProtKB/Swiss-Prot;Acc:Q9SZH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.