Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d015093_P001 | Maize | cytosol | 70.35 | 77.56 |
TraesCS6B01G113100.1 | Wheat | cytosol | 51.36 | 56.75 |
TraesCS6A01G084000.1 | Wheat | cytosol | 52.52 | 56.58 |
Os02t0125500-00 | Rice | cytosol | 47.09 | 55.35 |
HORVU6Hr1G014510.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 50.39 | 52.53 |
Solyc05g041740.1.1 | Tomato | plastid | 17.83 | 43.81 |
KRH02776 | Soybean | nucleus | 35.66 | 42.2 |
KRH19104 | Soybean | nucleus | 35.27 | 41.74 |
KRH12329 | Soybean | cytosol, nucleus | 34.88 | 40.72 |
KRH37335 | Soybean | cytosol, nucleus | 33.91 | 39.5 |
Solyc08g074330.1.1 | Tomato | plastid | 16.67 | 37.89 |
EER94472 | Sorghum | cytosol | 33.14 | 37.83 |
VIT_11s0052g00030.t01 | Wine grape | plastid | 33.91 | 37.55 |
Solyc05g043210.1.1 | Tomato | plastid | 18.22 | 37.15 |
PGSC0003DMT400076105 | Potato | plastid | 31.59 | 35.28 |
Solyc07g008490.2.1 | Tomato | nucleus | 32.56 | 34.85 |
AT4G26000.1 | Thale cress | cytosol | 32.17 | 33.54 |
CDY49999 | Canola | cytosol, endoplasmic reticulum, nucleus | 30.43 | 32.71 |
Bra019133.1-P | Field mustard | cytosol | 25.19 | 32.66 |
CDY42768 | Canola | cytosol | 31.2 | 32.66 |
GSMUA_Achr8P14980_001 | Banana | cytosol | 35.27 | 32.5 |
CDX89376 | Canola | cytosol | 26.74 | 32.47 |
CDX92741 | Canola | cytosol | 31.01 | 32.45 |
Bra013940.1-P | Field mustard | cytosol | 26.55 | 32.24 |
GSMUA_Achr11P... | Banana | mitochondrion | 34.88 | 31.41 |
CDY65294 | Canola | cytosol | 25.97 | 30.52 |
Solyc05g042180.1.1 | Tomato | plastid | 15.31 | 28.94 |
PGSC0003DMT400046406 | Potato | cytosol | 32.75 | 28.64 |
Solyc05g043200.1.1 | Tomato | nucleus, peroxisome, plastid | 17.05 | 27.5 |
EES16283 | Sorghum | cytosol | 26.36 | 26.72 |
OQU91315 | Sorghum | plastid | 24.22 | 25.72 |
EER94248 | Sorghum | nucleus | 23.06 | 20.24 |
KXG39277 | Sorghum | nucleus | 17.44 | 16.61 |
OQU80050 | Sorghum | nucleus | 15.31 | 12.56 |
EES02175 | Sorghum | nucleus, plastid | 16.09 | 11.59 |
KXG20038 | Sorghum | nucleus | 13.76 | 10.63 |
OQU88922 | Sorghum | nucleus, peroxisome, plastid | 12.98 | 10.4 |
KXG38256 | Sorghum | nucleus | 15.31 | 9.88 |
KXG35952 | Sorghum | plastid | 10.47 | 8.68 |
Protein Annotations
Gene3D:3.30.1370.10 | Gene3D:3.30.310.210 | MapMan:35.1 | UniProt:A0A194YMC4 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR036612 | InterPro:KH_dom | InterPro:KH_dom_type_1 | InterPro:KH_dom_type_1_sf |
EnsemblPlants:KXG29352 | ProteinID:KXG29352 | ProteinID:KXG29352.1 | PFAM:PF00013 | PFscan:PS50084 | PANTHER:PTHR10288 |
PANTHER:PTHR10288:SF169 | SMART:SM00322 | EnsemblPlantsGene:SORBI_3004G024400 | SUPFAM:SSF54791 | UniParc:UPI0007F2CF33 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:1987999..1992778
Molecular Weight (calculated)
57486.2 Da
IEP (calculated)
4.638
GRAVY (calculated)
-0.567
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPPSPPRPC EEEEEEEAEI DFDEEEEDPE EVEPWFTSSS DSEAEREPKR PAALEPPPPP IPFPAPAWAV PPEQQPAPIT AVEAEKKGDG DSDARPRWPG
101: TNVFRLVVPT DKVGGVIGRR GETIKRLCDE TRARIRVLDA PLGAACRIVL VSAKEEVEAE MSPAMNAAIK IFKHINEIEE INSDGTLSAS ASDICSVRLL
201: VPFEQAVHLI GKQGVTIKSI EESTGTTVRI RDEDELLSHE TVDERIVEIR GASLKVLNAL KSVLELLRKF LVDHGVLHLF ERKNQEVVQP QDASNYPLAV
301: NQDFLLSDQR SHGDPISSRL LYGHDPSFCG PHHATDSLMI QSRANPKGSR FLYGRDPSFH DPYSRDLSQP TDSLITKITR TMQVPLAYAE DVIGVRGENI
401: EYIRSVSGAV VALEEIGDYQ EVQVMIEGTP SQVQTAHQLV QEVISGDRAP PSRSSYYNSE GADPGLLNSP HVGSRFLHSP RAIATSREYL PWQYEEQTPH
501: GHWRNPTHYD YRGYRP
101: TNVFRLVVPT DKVGGVIGRR GETIKRLCDE TRARIRVLDA PLGAACRIVL VSAKEEVEAE MSPAMNAAIK IFKHINEIEE INSDGTLSAS ASDICSVRLL
201: VPFEQAVHLI GKQGVTIKSI EESTGTTVRI RDEDELLSHE TVDERIVEIR GASLKVLNAL KSVLELLRKF LVDHGVLHLF ERKNQEVVQP QDASNYPLAV
301: NQDFLLSDQR SHGDPISSRL LYGHDPSFCG PHHATDSLMI QSRANPKGSR FLYGRDPSFH DPYSRDLSQP TDSLITKITR TMQVPLAYAE DVIGVRGENI
401: EYIRSVSGAV VALEEIGDYQ EVQVMIEGTP SQVQTAHQLV QEVISGDRAP PSRSSYYNSE GADPGLLNSP HVGSRFLHSP RAIATSREYL PWQYEEQTPH
501: GHWRNPTHYD YRGYRP
001: MAAVADSVEN NGSINLPENE NLIPAGFSAA ALLDENSGAF PELNQPDSLA AAETTFPDTN DSAEERWPGW PGDCVFRMIV PVTKVGAIIG RKGDFIKKMC
101: EETRARIKVL DGPVNTPDRI VLISGKEEPE AYMSPAMDAV LRVFRRVSGL PDNDDDDVQN AGSVFSSVRL LVASTQAINL IGKQGSLIKS IVENSGASVR
201: ILSEEETPFY AAQDERIVDL QGEALKILKA LEAIVGHLRR FLVDHTVVPL FEKQYLARVS QTRQEEPLAE SKSSLHTISS NLMEPDFSLL ARREPLFLER
301: DSRVDSRVQP SGVSIYSQDP VLSARHSPGL ARVSSAFVTQ VSQTMQIPFS YAEDIIGVEG ANIAYIRRRS GATITIKESP HPDQITVEIK GTTSQVQTAE
401: QLIQEFIINH KEPVSVSGGY ARIDSGYVPA YPPQLSNRQE PLPSTYMGTE PVQYRPTAYS QLGGPSTYTP TLTGQTYGSE YRPASDVGGY SSYNL
101: EETRARIKVL DGPVNTPDRI VLISGKEEPE AYMSPAMDAV LRVFRRVSGL PDNDDDDVQN AGSVFSSVRL LVASTQAINL IGKQGSLIKS IVENSGASVR
201: ILSEEETPFY AAQDERIVDL QGEALKILKA LEAIVGHLRR FLVDHTVVPL FEKQYLARVS QTRQEEPLAE SKSSLHTISS NLMEPDFSLL ARREPLFLER
301: DSRVDSRVQP SGVSIYSQDP VLSARHSPGL ARVSSAFVTQ VSQTMQIPFS YAEDIIGVEG ANIAYIRRRS GATITIKESP HPDQITVEIK GTTSQVQTAE
401: QLIQEFIINH KEPVSVSGGY ARIDSGYVPA YPPQLSNRQE PLPSTYMGTE PVQYRPTAYS QLGGPSTYTP TLTGQTYGSE YRPASDVGGY SSYNL
Arabidopsis Description
PEPRNA-binding KH domain-containing protein PEPPER [Source:UniProtKB/Swiss-Prot;Acc:Q9SZH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.